Disease | Genus and Species | Protein | BMRB entry |
---|---|---|---|
Chickenpox/Shingles | Varicella Zoster virus | MED25 comprising the ACID domain* | 17323 |
Chikungunya Virus | Togaviridae Alphavirus | VT18 | 21019 |
Crimean Congo Hemorrhagic Fever | Nairovirus CCHFV | Gn Zinc finger | 17383 |
Cytomegalovirus | Cytomegalovirus Human Cytomegalovirus | BAX and cytomegalovirus protein vMIA* | 18340 |
Terminal domain of pUL89 15522 | 15522 | ||
Dengue Fever | Flavivirus Dengue virus | NS2B-NS3p | 18266 |
TMS2 domain of NS4A protein | 17043 | ||
Ebola | Ebolavirus Zaire ebolavirus | Complete internal fusion loop from GP2 | 17638 17639 |
Ebola fusion peptide | 11004 | ||
Second CARD of RIG-I | 18622 18623 | ||
Human NEDD4 3RD WW domain complex with Ebola Zaire virus matrix protein VP40 derived peptide ILPTAPPEYMEA | 16575 | ||
Hepatitis A | Hepatovirus Hepatitis A virus | 3C protease | 4836 16837 |
Hepatitis B | Orthohepadnavirus Hepatitis B virus | Human HBV core protein | 15969 |
Hepatitis C | Hepacivirus Hepatitis C virus | Capsid protein | 4669 |
Core-E1 signal peptide | 16601 | ||
Core+1/S polypeptide | 16487 | ||
Domain 2 of the non-structural 5A protein | 16165 | ||
Domain 3 of the non-structural 5A protein | 16166 16798 16799 16800 | ||
Envelope glycoprotein E2 | 17011 | ||
Glycoproteins E1 | 4699 | ||
Human La protein* | 17878 | ||
Internal ribosome entry site domain IIId | 15697 | ||
KKGF | 17891 | ||
N-terminal domain of non-structural protein 4A | 20123 | ||
Non-structural protein 2 | 16886 16892 | ||
Non-structrual protein 2 serine protease | 4617 | ||
Non-structural protein 3 RNA helicase | 4791 4885 | ||
Non-structural protein 4B | 16122 18568 | ||
Non-structural protein 5A | 5978 15225 17468 26549 | ||
p7 polypeptide | 6087 18863 25178 25181 | ||
Tetraspanin CD81* | 18280 | ||
Transmembrane proximal region of E1 glycoprotein* | 16477 | ||
Herpes simplex | Simplexvirus Herpes Simplex virus 1 | Fusion peptide | 15647 15648 15649 |
gH Fusion peptide | 16699 16700 | ||
Glycoprotein D-1 | 26 | ||
Glycoprotein H | 18335 | ||
HVS ORF57 | 16698 | ||
ICP27 | 16696 | ||
ICP47 | 4557 | ||
REF2-I/ICP27 complex* | 16683 | ||
RRM domain of REF2-I* | 16697 | ||
Human immunodeficiency virus | Lentivirus human immunodeficiency virus | C-terminal zinc knuckle | 17228 |
C-terminal zinc knuckle with DNA | 17229 | ||
Fusion peptide | 16595 | ||
gp120 and HIV | 1885 1886 1887 | ||
Prostatic acid phosphatase* | 18287 | ||
REV-HIV | 20093 | ||
TAR-RNA binding protein* | 18324 | ||
Triparite motif protein* | 18097 | ||
Human immunodeficiency virus 1 | Lentivirus human immunodeficiency virus 1 | BST-2* | 17985 |
C-terminal domain of VPR | 4257 | ||
C-terminal half of VPR* | 4192 | ||
Capsid protein* | 4220 | ||
CCR5-peptide/HIV-1 gp120/CD4-mimic peptide complex* | 17395 | ||
Dimeric C-terminal domain of capsid protein | 16555 | ||
gp120 | 1885 1886 1887 4322 | ||
gp41 clade C MPER peptide | 19513 | ||
gp41-M-MAT membrane associated MPER trimer | 18237 | ||
Hck kinase* | 17740 | ||
Hck32L/Nef | 17819 | ||
HIV-1 protease* | 18138 26511 | ||
Inactive protease Bmut5 | 17994 | ||
Inactive protease CRF01_AE | 17964 | ||
Inactive protease subtype C | 17996 | ||
Integrase core domain | 16695 | ||
Integrase Zn finger domain mutant | 10015 | ||
Monomeric mutant of the HIV-1 capsid protein | 17738 | ||
Mutant C-terminal domain of capsid/stapled peptide inhibitor complex | 17307 | ||
N-terminal Vpr peptides | 17003 | ||
Nef | 17922 | ||
Nef anchor domain | 4950 4951 | ||
Nucleic acid binding protein | 1640 | ||
p55F1 zinc fingerlike domain | 252 | ||
P75/LEDGF PWWP domain* | 18478 | ||
PPBS/NCp(12-55) exchange | 17216 | ||
Protease-substrate complex | 16416 | ||
RNase H domain | 4097 | ||
RNase H domain of reverse transcriptase | 4093 | ||
V3 loop peptide of envelope protein gp120 | 4298 4322 | ||
Vpr | 16461 | ||
Zinc binding domain from nucleocapsid protein | 1656 2217 | ||
Human immunodeficiency virus 2 | Lentivirus human immunodeficiency virus 2 | Myristoylated matrix protein | 16888 |
myrMA bound to di-C4-P1P2 | 16889 | ||
Unmyristoylated matrix protein | 16887 | ||
Human papillomavirus | Human papillomavirus | E2 protein | 4035 |
Alphapapillomavirus HPV 26 | E6-binding zinc finger | 6064 | |
Alphapapillomavirus HPV 26 | hDig/E6 complex* | 17942 | |
Alphapapillomavirus HPV 16 | HPV16 E6 | 17967 17968 | |
Influenza | Influenza virus A | AM2-BM2 chimeric channel | 17928 17929 |
Fusion peptide | 16597 | ||
G8A mutant of hemagglutinin | 18617 | ||
Hemagglutinin fusion peptide H1 | 16907 | ||
Hemagglutinin fusion peptide mutant G13A | 17240 | ||
Influenza A virus protein PB1-F2 | 7258 7289 7290 | ||
M2 transmembrane peptide | 16020 16612 | ||
NS1 | 4317 | ||
Influenza virus B | NS1 RNA binding site | 25463 | |
Human T-cell Lymphotropic Virus Type 1 | human NEDD4 3RD WW domain complex with the HTLV-1 GAG-PRO poliprotein derived peptide SDPQIPPPYVEP | 16574 | |
Measles | Morbillivirus Measles Virus | XD domain | 16000 |
Polio | Enterovirus C | Genome linked protein VPg* | 6898 |
Poliovirus 3A protein | 5753 | ||
PV1-VPgpU | 20110 | ||
Rabies | Lyssavirus Rabies virus | MAST2/PDZ-C-terminus* | 16967 |
Severe Acute Respiratory Syndrome | Betacoronavirus SARS coronavirus | C-terminal domain of Nucleocapsid protein | 15111 17217 |
Domain 513-651 from NSP3 | 15469 | ||
Domain-C from NSP3 | 16008 | ||
HR2 domain | 6969 | ||
Main protease | 17251 | ||
N-terminal domain of Nucleocapsid protein | 6372 | ||
Nonstructural protein 1 | 7014 | ||
Nonstructural protein 3 | 15618 15723 | ||
Nonstructural protein 7 | 6513 16981 | ||
Nonstructural protein 9 | 6501 | ||
ORF 7a coded X4 protein | 6824 | ||
Protease | 17911 | ||
Unique domain SUD | 16613 | ||
Viral Gastroenteritis | Norovirus norwalk virus | Protease | 17253 |
West Nile virus | Flavivirus West Nile virus | Domain III of the envelope protein | 6046 |
NS2B-NS3 protease | 11053 | ||
West Nile protease | 16359 | ||
Yellow Fever virus | Flavivirus Yellow fever virus | Domain III of the envelope protein | 15034 |
* Denotes human/other natural source
Disease | Genus and Species | Nucleic Acid | BMRB entry |
---|---|---|---|
Hepatitis B | Orthohepadnavirus Hepatitis B virus | Stem-loop alpha of HBV | 15745 |
UGGU tetraloop of HBV | 15157 | ||
Herpes Simplex | Simplexvirus Herpes simplex virus | GCGAAGC hairpin | 5882 |
Human immunodeficiency virus | Lentivirus human immunodeficiency virus | C-terminal zinc knuckle with DNA | 17229 |
Human immunodeficiency virus 1 | Lentivirus human immunodeficiency virus 1 | Exon splicing silencer 3 | 17671 |
HIV TAR RNA | 17408 | ||
HIV TAR RNA and RNA aptamer | 11014 | ||
HIV TAR RNA and peptide mimic of Tat protein | 16941 | ||
HIV-1 frameshift site RNA | 17436 | ||
SL3 hairpin from packaging signal | 4175 | ||
TAR RNA bulge and Tat protein complex | 16877 | ||
Human immunodeficiency virus 2 | Lentivirus human immunodeficiency virus 2 | Complex of TAR RNA and tripeptide | 16431 |
Influenza | Influenza virus A | Influenza A virus C4 promoter | 5553 |
Influenza A virus cRNA promoter | 5528 | ||
Influenza A virus promoter RNA | 4816 18633 | ||
Severe Acute Respiratory Syndrome | Betacoronavirus SARS coronavirus | Coronaviral stem-loop 2 | 17309 |