BMRB Entry 18097

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PDB ID: 2lm3
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18097
MolProbity Validation Chart

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Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for primate innate immunity protein
Deposition date:
2011-11-21
Original release date:
2012-08-06
Authors:
Biris, Nikolaos; Yang, Yang; Taylor, Alexander; Tomashevski, Andrei; Guo, Miao; Hart, P.; Diaz-Griffero, Felipe; Ivanov, Dmitri
Citation:

Citation: Biris, Nikolaos; Yang, Yang; Taylor, Alexander; Tomashevski, Andrei; Guo, Miao; Hart, P. John; Diaz-Griffero, Felipe; Ivanov, Dmitri. "Structure of the rhesus monkey TRIM5 PRYSPRY domain, the HIV capsid recognition module."  Proc. Natl. Acad. Sci. U.S.A. 109, 13278-13283 (2012).
PubMed: 22847415

Assembly members:

Assembly members:
SPRY, polymer, 208 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET 30a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SPRY: GTELTDARRYWVDVTLATNN ISHAVIAEDKRQVSSRNPQI MYQAPGTLFTFPSLTNFNYC TGVLGSQSITSGKHYWEVDV SKKSAWILGVCAGFQSDAMY NIEQNENYQPKYGYWVIGLQ EGVKYSVFQDGSSHTPFAPF IVPLSVIICPDRVGVFVDYE ACTVSFFNITNHGFLIYKFS QCSFSKPVFPYLNPRKCTVP MTLCSPSS

Data sets:
Data typeCount
13C chemical shifts326
15N chemical shifts143
1H chemical shifts341

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1rhesus SPRY1

Entities:

Entity 1, rhesus SPRY 208 residues - Formula weight is not available

1   GLYTHRGLULEUTHRASPALAARGARGTYR
2   TRPVALASPVALTHRLEUALATHRASNASN
3   ILESERHISALAVALILEALAGLUASPLYS
4   ARGGLNVALSERSERARGASNPROGLNILE
5   METTYRGLNALAPROGLYTHRLEUPHETHR
6   PHEPROSERLEUTHRASNPHEASNTYRCYS
7   THRGLYVALLEUGLYSERGLNSERILETHR
8   SERGLYLYSHISTYRTRPGLUVALASPVAL
9   SERLYSLYSSERALATRPILELEUGLYVAL
10   CYSALAGLYPHEGLNSERASPALAMETTYR
11   ASNILEGLUGLNASNGLUASNTYRGLNPRO
12   LYSTYRGLYTYRTRPVALILEGLYLEUGLN
13   GLUGLYVALLYSTYRSERVALPHEGLNASP
14   GLYSERSERHISTHRPROPHEALAPROPHE
15   ILEVALPROLEUSERVALILEILECYSPRO
16   ASPARGVALGLYVALPHEVALASPTYRGLU
17   ALACYSTHRVALSERPHEPHEASNILETHR
18   ASNHISGLYPHELEUILETYRLYSPHESER
19   GLNCYSSERPHESERLYSPROVALPHEPRO
20   TYRLEUASNPROARGLYSCYSTHRVALPRO
21   METTHRLEUCYSSERPROSERSER

Related Database Links:

PDB 2LM3 4B3N
GB AAS48505 AAT48102 AAV91976 AAW55814 AAW55816
REF NP_001028082 NP_001106102 NP_001292893 XP_011827364 XP_011900561
SP Q0PF16 Q2YEN2 Q5D7J2
AlphaFold Q0PF16 Q2YEN2 Q5D7J2

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks