BMRB Entry 15648

Name: 1H chemical shift and NMR structure of Herpes simplex virus type 1 (HSV-1)fusion peptide R642S gH626-644
Published: 2008-08-22

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15648

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H chemical shift and NMR structure of Herpes simplex virus type 1 (HSV-1)fusion peptide R642S gH626-644

Deposition date:

2008-02-03

Original release date:

2008-08-22

Authors:

Raiola, Luca; Falanga, Annarita; Isernia, Carla; Galdiero, Stefania; Fattorusso, Roberto; Pedone, Carlo

Citation:

Citation: Galdiero, Stefania; Falanga, Annarita; Vitiello, Mariateresa; Raiola, Luca; Fattorusso, Roberto; Browne, Helena; Pedone, Carlo; Isernia, Carla; Galdiero, Massimiliano. "Analysis of a membrane interacting region of herpes simplex virus type 1 glycoprotein H" J. Biol. Chem. 283, 29993-30009 (2008).
PubMed: 18678872

Assembly members:

Assembly members:
HSV-1_gH_protein,_R642S_gH626-644_fusion_peptide, polymer, 19 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: 10298 Superkingdom: Viruses Kingdom: not available Genus/species: Simplexvirus Human herpesvirus 1

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
HSV-1_gH_protein,_R642S_gH626-644_fusion_peptide: GLASTLTRWAHYNALISAF

Data sets:

assigned_chemical_shifts
- R642S_gH626-644_chem_shift_list_1

Data type	Count
1H chemical shifts	135

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HSV-1 gH protein, R642S gH626-644 fusion peptide	1

Entities:

Entity 1, HSV-1 gH protein, R642S gH626-644 fusion peptide 19 residues - Formula weight is not available

1

GLY

LEU

ALA

SER

THR

LEU

THR

ARG

TRP

ALA

2

HIS

TYR

ASN

ALA

LEU

ILE

SER

ALA

PHE

Samples:

R642S_gH626-644: TFE, [U-99% 2H], 80 v/v; H2O 20 v/v; R642S gH626-644 2 mM

R642S_gH626-644_conditions: pressure: 1 atm; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	R642S_gH626-644	isotropic	R642S_gH626-644_conditions
2D DQF-COSY	R642S_gH626-644	isotropic	R642S_gH626-644_conditions
2D 1H-1H NOESY	R642S_gH626-644	isotropic	R642S_gH626-644_conditions

Software:

XEASY, Bartels et al. - chemical shift assignment, structure solution

CYANA, Guntert, Mumenthaler and Wuthrich - chemical shift assignment, structure solution

NMR spectrometers:

Varian INOVA 500 MHz