Entry ID | Original Release date | Data summary | Entry Title | Citation Title | Authors | Additional Matches |
---|---|---|---|---|---|---|
34780 | 2024-03-07 | Chemical Shifts: 1 set |
Tetra-stranded double-ion dependent DNA (diDNA) NMR structure of telomeric C.elegans fragment | Tetra-stranded double-ion dependent DNA (diDNA) NMR structure of telomeric C.elegans fragment | L Trantirek, M Lenarcic Zivkovic | |
30575 | 2019-08-09 | Chemical Shifts: 1 set |
The putative coiled coil domain of NPHP1 folds as a three helix bundle | The N-Terminal Domain of NPHP1 Folds into a Monomeric Left-Handed Antiparallel Three-Stranded Coiled Coil with Anti-apoptotic Function | A Boletta, C Minici, E A Nigro, G Musco, G Quilici, M Degano, M Lampis, V Mannella | |
30572 | 2019-05-28 | Chemical Shifts: 1 set |
Dimer-of-dimer amyloid fibril structure of glucagon | The peptide hormone glucagon forms amyloid fibrils with two coexisting beta-strand conformations | A J Dregni, D J Pochan, K J Smith, M D Gelenter, M Hong, M S Lamm, S Y Liao, T J Tucker, V S Mandala, X Wei, Y Su, Y Tian | |
34326 | 2019-03-14 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1/2 of Drosophila helicase MLE | Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless. | A W Thomae, B Simon, J Hennig, M Muller, N M Hollmann, P B Becker, P C Chen, P K Ankush Jagtap, P Masiewicz, S von Bulow | |
27598 | 2019-02-07 | Chemical Shifts: 1 set |
XRCC1-BRCT1 | Efficient Single-Strand Break Repair Requires Binding to Both Poly(ADP-Ribose) and DNA by the Central BRCT Domain of XRCC1. | Antony W Oliver, Fernando Garces, Keith W Caldecott, Laurence H Pearl, Luis M Polo, Peter Hornyak, Richard Hailstone, Steve J Matthews, Yingqi Xu, Zhihong Zeng | |
30495 | 2018-10-31 | Chemical Shifts: 1 set |
Solution NMR structure of a de novo designed double-stranded beta-helix | De novo design of a non-local beta-sheet protein with high stability and accuracy. | Andrew C McShan, Audrey Davis, David Baker, Enrique Marcos, Gustav Oberdorfer, Konstantinos Tripsianes, Lauren Carter, Lucas G Nivon, Nikolaos G Sgourakis, Santrupti Nerli, Tamuka M Chidyausiku, Thomas Evangelidis | |
34292 | 2019-04-22 | Chemical Shifts: 1 set |
The CTD of HpDprA, a DNA binding Winged Helix domain which do not bind dsDNA | The C-terminal domain of HpDprA is a DNA-binding winged helix domain that does not bind double-stranded DNA. | D Durand, D Sanchez, F Ochsenbein, J Andreani, J Lisboa, J P Radicella, L Celma, M Marquis, P Cuniasse, R Guerois, S Marsin, S Quevillon-Cheruel | |
34183 | 2018-03-09 | Chemical Shifts: 1 set Spectral_peak_list: 1 set |
Nemertide alpha-1 | Lineus longissimus, the longest animal on earth, expresses peptide toxins targeting voltage gated sodium channels | C Eriksson, E Jacobsson, H Loden, H S Andersson, J Tytgat, K J Rosengren, K M Lebbe, M Shariatgorji, M Strand, P E Andren, S Peigneur, U Goransson | |
27148 | 2019-04-15 | Chemical Shifts: 2 sets |
Backbone and side chain chemical shift assignments of wild-type PACT-D3. | Conserved asymmetry underpins homodimerization of Dicer-associated double-stranded RNA-binding proteins. | Alex Heyam, Claire E Coupland, Clement Degut, Dimitris Lagos, Gunter Meister, Leonhard Jakob, Michael J Plevin, Michael P Williamson, Nicola J Baxter, Pedro M Aguiar, Ruth A Haley | |
27143 | 2019-04-15 | Chemical Shifts: 1 set Spectral_peak_list: 7 sets |
Backbone and side chain chemical shift assignments of human PACT-D3 L273R | Conserved asymmetry underpins homodimerization of Dicer-associated double-stranded RNA-binding proteins. | Alex Heyam, Claire E Coupland, Clement Degut, Dimitris Lagos, Gunter Meister, Leonhard Jakob, Michael J Plevin, Michael P Williamson, Nicola J Baxter, Pedro M Aguiar, Ruth A Haley | |
34104 | 2018-02-19 | Chemical Shifts: 1 set |
Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex A) | Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains | A Holla, A L Malinowska, B Schuler, C Maris, F Aeschimann, G Jeschke, G Masliah, H TF Allain, J Mabille, J Weiler, L BS Koenig, M Yulikov, N Meisner-Kober | |
34103 | 2018-02-19 | Chemical Shifts: 1 set |
Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex B) | Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains | A Holla, A L Malinowska, B Schuler, C Maris, F Aeschimann, G Jeschke, G Masliah, H TF Allain, J Mabille, J Weiler, L BS Koenig, M Yulikov, N Meisner-Kober | |
30184 | 2017-08-04 | Chemical Shifts: 1 set |
Solution structure of parallel stranded adenosine duplex r(AAAA)-dA-r(AAA) | Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA. | Alexey Y Denisov, Anne M Noronha, Christopher J Wilds, Christopher Liczner, Jingwei Xie, Kalle Gehring, Nozhat Safaee, William Copp | |
30061 | 2017-04-06 | Chemical Shifts: 1 set |
Structure of anastellin bound to beta-strands A and B from the third type III domain of fibronectin | The Interaction between the Third Type III Domain from Fibronectin and Anastellin Involves beta-Strand Exchange | C Schlenker, D V Rusnac, G JH Ahl, J M Stine, K Briknarova | |
25924 | 2016-12-15 | Chemical Shifts: 1 set |
Drosha Quad | Engineering double-stranded RNA binding activity into the Drosha double-stranded RNA binding domain results in a loss of microRNA processing function | Debashish Sahu, Durga M Chadalavada, Joshua C Kranick, Scott A Showalter | |
25890 | 2015-11-25 | Chemical Shifts: 1 set |
1H chemical shift assignments for 45 nucleotide DNA dumbbell (model for single-strand break with one-nucleotide gap) | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25891 | 2015-11-25 | Chemical Shifts: 1 set |
1H, 13C and 15N chemical shift assignments for PARP-1 F1F2F3 domains in complex with a DNA single-strand break | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25888 | 2015-11-25 | Chemical Shifts: 3 sets |
1H, 13C and 15N chemical shift assignments and solution structure for PARP-1 F1F2 domains in complex with a DNA single-strand break | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25894 | 2015-11-25 | Chemical Shifts: 2 sets |
1H and 15N chemical shift assignments for PARP-1 F1F2F3 domains in complex with PARP-1 WGR domain and a DNA single-strand break | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25893 | 2015-11-25 | Chemical Shifts: 1 set |
1H, 13C and 15N chemical shift assignments for PARP-1 F3 domain | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25892 | 2015-11-25 | Chemical Shifts: 1 set |
1H, 13C and 15N chemical shift assignments for PARP-1 F1F2F3 domains | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25895 | 2015-11-25 | Chemical Shifts: 1 set |
1H, 13C and 15N chemical shift assignments for PARP-1 WGR domain | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25889 | 2015-11-25 | Chemical Shifts: 1 set |
1H, 13C and 15N chemical shift assignments for PARP-1 F1F2 domains (at 200mM NaCl) | Structural basis of detection and signaling of DNA single-strand breaks by human PARP 1 | Amanda Riccio, David Neuhaus, Ji-Chun Yang, John M Pascal, Laura E Easton, Marie-France Langelier, Sebastian Eustermann, Wing-Fung Wu | |
25765 | 2015-10-26 | Chemical Shifts: 1 set |
NMR structure for a 2-stranded parallel beta-sheet | Impact of Strand Number on Parallel beta-Sheet Stability | Gabriel Cornilescu, Samuel H Gellman, Vanessa M Kung | |
25764 | 2015-10-26 | Chemical Shifts: 1 set |
NMR structure for a 2-stranded parallel beta-sheet | Impact of Strand Number on Parallel beta-Sheet Stability | Gabriel Cornilescu, Samuel H Gellman, Vanessa M Kung | |
25673 | 2015-10-26 | Chemical Shifts: 1 set |
NMR structure for a 3-stranded parallel beta-sheet | Impact of Strand Number on Parallel beta-Sheet Stability | Gabriel Cornilescu, Samuel H Gellman, Vanessa M Kung | |
19271 | 2014-02-13 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for CRABPI | The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of -Sheets. | Anastasia Zhuravleva, Ivan L Budyak, Lila M Gierasch | |
18393 | 2013-01-22 | Chemical Shifts: 1 set |
The second dsRBD domain from A. thaliana DICER-LIKE 1 | Second double-stranded RNA binding domain of dicer-like ribonuclease 1: structural and biochemical characterization. | Beate Bersch, Irina P Suarez, Javier F Palatnik, Nicolas G Bologna, Paula Burdisso, Rodolfo M Rasia | |
17386 | 2011-01-28 | Chemical Shifts: 1 set |
RBM10 RanBP2 zinc finger backbone chemical shifts | Characterization of a Family of RanBP2-Type Zinc Fingers that Can Recognize Single-Stranded RNA. | Cuong D Nguyen, Fionna E Loughlin, Joel P Mackay, Paula M Vaz, Richard P Grant, Robyn E Mansfield, Wilfred Leung | |
17380 | 2011-01-25 | Chemical Shifts: 1 set |
rbp56 RanBP2 zinc finger backbone chemical shifts | Characterization of a Family of RanBP2-Type Zinc Fingers that Can Recognize Single-Stranded RNA. | Cuong D Nguyen, Fionna E Loughlin, Joel P Mackay, Paula M Vaz, Richard P Grant, Robyn E Mansfield, Wilfred Leung | |
17385 | 2011-01-28 | Chemical Shifts: 1 set |
TEX13A RanBP2 zinc finger backbone chemical shifts | Characterization of a Family of RanBP2-Type Zinc Fingers that Can Recognize Single-Stranded RNA. | Cuong D Nguyen, Fionna E Loughlin, Joel P Mackay, Paula M Vaz, Richard P Grant, Robyn E Mansfield, Wilfred Leung | |
17387 | 2011-01-28 | Chemical Shifts: 1 set |
RBM5 RanBP2 zinc finger backbone chemical shifts | Characterization of a Family of RanBP2-Type Zinc Fingers that Can Recognize Single-Stranded RNA. | Cuong D Nguyen, Fionna E Loughlin, Joel P Mackay, Paula M Vaz, Richard P Grant, Robyn E Mansfield, Wilfred Leung | |
17133 | 2011-01-25 | Chemical Shifts: 1 set |
Chemical shift assignments for the RanBP2-type ZnF from Ewing's Sarcoma (EWS) | Characterization of a Family of RanBP2-Type Zinc Fingers that Can Recognize Single-Stranded RNA. | Cuong D Nguyen, Fionna E Loughlin, Joel P Mackay, Paula M Vaz, Richard P Grant, Robyn E Mansfield, Wilfred Leung | |
16223 | 2009-11-23 | Chemical Shifts: 1 set |
Aflatoxin Formamidopyrimidine alpha anomer in single strand DNA | Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA. | Constance M Harris, Kyle L Brown, Markus W Voehler, Michael P Stone, Shane M Magee, Thomas M Harris | |
16222 | 2009-11-23 | Chemical Shifts: 1 set |
NMR Structure of Aflatoxin Formamidopyrimidine alpha-anomer in duplex DNA | Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA. | Constance M Harris, Kyle L Brown, Markus W Voehler, Michael P Stone, Shane M Magee, Thomas M Harris | |
15117 | 2008-02-11 | Chemical Shifts: 1 set |
Backbone H, C, N Chemical Shifts for Influenza A NS1 (1-73) Protein Bound to dsRNA | Conserved surface features form the double-stranded RNA binding site of non-structural protein 1 (NS1) from influenza A and B viruses. | Asli Ertekin, Cuifeng Yin, Gaetano T Montelione, Gurla VT Swapna, Javed A Khan, Liang Tong, Robert M Krug | |
6975 | 2006-04-27 | Chemical Shifts: 1 set |
1H chemical shift assignments for Bcl2MidG4 | An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution | A Ambrus, Danzhou Yang, Ding Chen, Jixun Dai, M Carver, Roger A Jones, T S Dexheimer | |
6655 | 2005-11-01 | Chemical Shifts: 1 set |
Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa | Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double-stranded RNA-binding Protein ZFa. | Heiko M Moller, H Jane Dyson, Maria A Martinez-Yamout, Peter E Wright | |
5779 | 2004-03-07 | Chemical Shifts: 1 set |
The Solution structure of HI1450 | Solution Structure of the highly acidic protein HI1450 from Haemophilus influenzae: a putative double-stranded DNA mimic | Deok Cheon Yeh, J Orban, L M Parsons | |
5775 | 2003-06-09 | Chemical Shifts: 2 sets |
5'(dCCUCCUU)3':3'(rAGGAGGAAA)5' | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines | B M Znosko, D H Turner, T R Krugh, T W Barnes | |
5777 | 2003-06-09 | Chemical Shifts: 2 sets |
PODN:RNA [5'-R(AAAGGAGGA)-3'/5'-D(XXXXXXX)-3'] | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines | B M Znosko, D H Turner, T R Krugh, T W Barnes | |
5776 | 2010-07-16 | Chemical Shifts: 2 sets |
sPrODN1:RNA [5'-R(AAAGGAGGA)-3'/5'-D(CXXXXXX)-3'] | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines | B M Znosko, D H Turner, T R Krugh, T W Barnes | |
5737 | 2003-09-15 | Chemical Shifts: 1 set |
Structure of the parallel-stranded DNA quadruplex d(TTAGGGA)4 containing the human telomeric repeat: evidence for A-tetrad formation from NMR and molecular dynamics simulation. | Structure of the Parallel-stranded DNA Quadruplex d(TTAGGGT)4 Containing the Human Telomeric Repeat: Evidence for A-tetrad Formation from NMR and Molecular Dynamics Simulations | E Gavathiotis, M S Searle | |
5681 | 2003-08-07 | Chemical Shifts: 1 set |
DIMERIC SOLUTION STRUCTURE OF THE CYCLIC OCTAMER CD(CGCTCATT) | Four-stranded DNA Structure Stabilized by a Novel C:G:A:T Tetrad | C Gonzalez, E Pedroso, J L Gelpi, M Orozco, M Rico, N Escaja | |
5232 | 2002-08-22 | Chemical Shifts: 1 set |
1H, 13C, and 15N resonance assignments of the DNA-binding domain of the essential protein Cdc13 complexed with single-stranded telomeric DNA | Letter to the Editor: 1H, 13C, and 15N resonance assignments of the DNA-binding domain of the essential protein Cdc13 complexed with single-stranded telomeric DNA | Deborah S Wuttke, Rachel M Mitton-Fry | |
4894 | 2000-12-06 | Chemical Shifts: 2 sets |
RNA recognition by a staufen double-stranded RNA-binding domain | RNA recognition by a staufen double-stranded RNA-binding domain | A Ramos, D R Micklem, D St Johnston, G Varani, J Adams, M Bycroft, M R Proctor, S Freund, S Grunert | |
4650 | 2002-06-26 | Chemical Shifts: 1 set Coupling Constants: 1 set |
Sheep prion protein synthetic peptide spanning helix 1 and b strand 2 (residues 142 to 166) shows b hairpin structure in solution | Structural Duality of a Peptide from Sheep Prion Protein may be One of the Causes of Prion Conversion | A K Mazur, G Bertho, G Hui Bon Hoa, H Rabesona, J-P Girault, M Takahashi, P Debey, S A Kozin, T Haertle | |
4721 | 2000-12-18 | Chemical Shifts: 1 set |
Structure of the Central Core Domain of TFIIEbeta with a Novel Double-stranded DNA-binding Surface | Structure of the Central Core Domain of TFIIEbeta with a Novel Double-stranded DNA-binding Surface | F Hanaoka, H Okamura, M Okuda, Y Nishimura, Y Ohkuma, Y Watanabe | |
4692 | 2001-03-02 | Chemical Shifts: 3 sets |
SOLUTION STRUCTURE OF A HUMAN TELOMERE FRAGMENT | The solution structure and internal motions of a fragment of the cytidine-rich strand of the human telomere | A T Phan, J L Leroy, M Gueron | |
4292 | 2000-03-02 | Chemical Shifts: 1 set |
NMR Structure of PSP1, Plasmatocyte-spreading Peptide from Pseudoplusia includens | Structure of the Insect Cytokine Peptide PSP1 from Pseudoplusia includens | B F Volkman, J L Markley, K D Clark, M E Anderson, M R Strand, Y Hayakawa | |
4120 | 2001-06-19 | Chemical Shifts: 1 set |
NMR Structure of a Classical Pseudoknot: Interplay of Single- and Double-Stranded RNA | NMR Structure of a Classical Pseudoknot: Interplay of Single- and Double-Stranded RNA | C WA Pleij, C W Hilbers, H A Heus, M H Kolk, M Van der Graaf, S S Wijmenga | |
3404 | 2008-03-24 | Chemical Shifts: 1 set |
A Single-Stranded Amphiphatic alpha-Helix in Aqueous Solution: Design, Structural Characterization, and Its Application for Determining alpha-Helical Propensities of Amino Acids | A Single-Stranded Amphiphatic alpha-Helix in Aqueous Solution: Design, Structural Characterization, and Its Application for Determining alpha-Helical Propensities of Amino Acids | Brian D Sykes, Cyril M Kay, Nian E Zhou, Robert S Hodges | |
4412 | 2000-06-19 | Chemical Shifts: 2 sets |
DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT | Solution Structure of the DNA Decamer Duplex Containing a 3'-T.T base pair of the cis-syn Cyclobutane Pyrimidine Dimer: Implication for the Mutagenic Property of the cis-syn Dimer | B -S Choi, J -H Lee, Y -J Choi | Entity name: strand- |
4368 | 2000-06-29 | Chemical Shifts: 1 set |
Chemical Shift Assignments for A35T vnd/NK2 Mutant Homeodomain | Structural Basis of an Embryonically Lethal Single Ala --> Thr Mutation in the vnd/NK-2 Homeodomain | Bosong Xiang, J A Ferretti, M Nirenberg, S Weiler | Entity name: strand 1 |
4392 | 2007-07-13 | Chemical Shifts: 3 sets |
Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscopy | Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscop | A H-J Wang, C Kaenzig, M Lee, X -L Yang | Entity name: DNA strand |
4103 | 1998-07-14 | Chemical Shifts: 1 set |
1H, 13C and 15N Chemical Shift Assignments of the 14mer DNA Duplex BS2 | NMR with 13C,15N-doubly-labeled DNA: the Antennapedia Homeodomain Complex with a 14mer DNA Duplex | Akira Ono, Cesar Fernandez, Hideo Iwai, Kurt Wuthrich, Masatsune Kainosho, Shin-ichi Tate, Thomas Szyperski | Entity name: BS2 strand B |
4104 | 1998-07-14 | Chemical Shifts: 1 set |
1H, 13C and 15N Chemical Shift Assignments of the 14mer DNA Duplex BS2 in the Complex with the Antennapedia Homeodomain | NMR with 13C,15N-doubly-labeled DNA: the Antennapedia Homeodomain Complex with a 14mer DNA Duplex | Akira Ono, Cesar Fernandez, Hideo Iwai, Kurt Wuthrich, Masatsune Kainosho, Shin-ichi Tate, Thomas Szyperski | Entity name: BS2 strand B |