| Entry ID |
Original Release date |
Data summary |
Entry Title |
Citation Title |
Authors |
| 52308 |
2024-04-17 |
Chemical Shifts: 1 set
|
Backbone chemical shift assignments of human ZNF706 |
Effects of protein G-quadruplex interactions on phase transitions and protein aggregation.
|
Anita Kotar, Bikash R Sahoo, Bryan B Guzman, Daniel Dominguez, Ee L Wong, Harry J Yang, James Bardwell, Janez Plavec, Nathan Clark, Nikhil Myers, Vojc Kocman, Xiexiong Deng |
| 34845 |
2024-02-02 |
Chemical Shifts: 1 set
|
d(ATTTC)3 dimeric structure |
Dimeric NMR structures of DNA ATTTC repeats in neurodegenerative diseases promoted by divalent cations
|
A Pastore, J Plavec, M Trajkovski |
| 34770 |
2023-02-14 |
Chemical Shifts: 1 set
|
Hairpin adopted by oligonucleotide A38 found in the promoter of AUTS2 gene. |
Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene
|
A Novotny, J Plavec, V Kocman |
| 34768 |
2023-02-14 |
Chemical Shifts: 1 set
|
Hairpin adopted by modified oligonucleotide A32_mod found in the promoter of AUTS2 gene. |
Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene
|
A Novotny, J Plavec, V Kocman |
| 34769 |
2023-02-14 |
Chemical Shifts: 1 set
|
Hairpin of adopted by oligonucleotide A36 found in the promoter of AUTS2 gene. |
Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene
|
A Novotny, J Plavec, V Kocman |
| 34714 |
2022-08-26 |
Chemical Shifts: 1 set
|
Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex |
Phen-DC3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation
|
A Ghosh, J Plavec, M P Teulade-Fichou, M Trajkovski, V Gabelica |
| 34611 |
2021-08-02 |
Chemical Shifts: 1 set
|
Three-quartet c-kit2 G-quadruplex stabilized by a pyrene conjugate |
c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry
|
I Durnik, J Plavec, K Peterkova, P Podbevsek, R Marek |
| 34553 |
2021-03-08 |
Chemical Shifts: 1 set
|
RNA duplex with a cytosine bulge in complex with berberine |
Interaction between berberine and RNA for the exploration of phytochemicals role
|
J Plavec, P Podbevsek |
| 34543 |
2021-03-08 |
Chemical Shifts: 1 set
|
Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter |
Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter
|
J Plavec, P Podbevsek, S Bielskute |
| 34542 |
2021-03-08 |
Chemical Shifts: 1 set
|
Antiparallel basket-type G-quadruplex DNA structure formed in human Bcl-2 promoter containing 8-oxoG |
Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter
|
J Plavec, P Podbevsek, S Bielskute |
| 34529 |
2021-05-21 |
Chemical Shifts: 1 set
|
G-quadruplex with a G-A bulge |
Structure of a DNA G-Quadruplex Related to Osteoporosis with a G-A Bulge Forming a Pseudo-loop
|
J Plavec, J Rozman, M Lenarcic Zivkovic |
| 34438 |
2020-07-27 |
Chemical Shifts: 1 set
|
Guanine-rich oligonucleotide with 5'- and 3'-GC ends form G-quadruplex with A(GGGG)A hexad, GCGC- and G-quartets and two symmetric GG and AA base pair |
GC ends control topology of DNA G-quadruplexes and their cation-dependent assembly
|
B Wang, D Pavc, I Drevensek-Olenik, J Plavec, L Spindler, P Sket |
| 34436 |
2020-07-20 |
Chemical Shifts: 1 set
|
Guanine-rich oligonucleotide with 5'-GC end form G-quadruplex with A(GGGG)A hexad, GCGC- and G-quartets and two symmetric GG and AA base pairs |
GC ends control topology of DNA G-quadruplexes and their cation-dependent assembly
|
B Wang, D Pavc, I Drevensek-Olenik, J Plavec, L Spindler, P Sket |
| 34435 |
2019-12-06 |
Chemical Shifts: 1 set
|
Intercalation of heterocyclic ligand between quartets in G-rich tetrahelical structure |
Intercalation of heterocyclic ligand between quartets in G-rich tetrahelical structure.
|
A Kotar, J Plavec, V Kocman |
| 34332 |
2019-01-25 |
Chemical Shifts: 1 set
|
Human telomeric G-quadruplex with 8-oxo-G substitution in the outer G-quartet |
Impact of Oxidative Lesions on the Human Telomeric G-quadruplex
|
J Plavec, P Podbevsek, S Bielskute |
| 34331 |
2019-01-25 |
Chemical Shifts: 1 set
|
Human telomeric G-quadruplex with 8-oxo-G substitution in the central G-quartet |
Impact of Oxidative Lesions on the Human Telomeric G-quadruplex
|
J Plavec, P Podbevsek, S Bielskute |
| 34297 |
2018-09-21 |
Chemical Shifts: 1 set
|
Adenine-driven structural switch from two- to three-quartet DNA G-quadruplex |
Adenine-driven structural switch from two- to three-quartet DNA G-quadruplex.
|
J Plavec, J Rozman, M Lenarcic Zivkovic |
| 34269 |
2019-01-07 |
Chemical Shifts: 1 set
|
Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure |
Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure.
|
A Kotar, C Sissi, J Plavec, R Rigo |
| 34168 |
2018-08-24 |
Chemical Shifts: 1 set
|
G-quadruplex structure of DNA oligonucleotide containing GGGGCC repeats linked to ALS and FTD |
NMR structure of a G-quadruplex formed by four d(G4C2) repeats: insights into structural polymorphism
|
J Brcic, J Plavec |
| 34083 |
2018-02-23 |
Chemical Shifts: 1 set
|
G-quadruplex formed within promoters of Plasmodium falciparum B var genes |
Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
|
J Plavec, M Juribasic Kulcsar, V Gabelica |
| 34084 |
2018-02-23 |
Chemical Shifts: 1 set
|
G-quadruplex formed within promoters of Plasmodium falciparum B var genes - form I |
Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
|
J Plavec, M Juribasic Kulcsar, V Gabelica |
| 34056 |
2017-05-25 |
Chemical Shifts: 1 set
|
Structure of DNA AGCGA-quadruplex adopted by 15-mer oligonucleotide found in regulatory region of the PLEKHG3 human gene with G11 to I11 mutation, d(GCGAGGGAGCIAGGG),VK34_I11 |
Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
|
J Plavec, V Kocman |
| 34054 |
2017-05-25 |
Chemical Shifts: 1 set
|
Structure of DNA tetrameric AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCGAGGG), VK34, oligonucleotide found in regulatory region of the PLEKHG3 human gene |
Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
|
J Plavec, V Kocman |
| 34053 |
2017-02-23 |
Chemical Shifts: 1 set
|
Structure of a stable G-hairpin |
Structure of a stable G-hairpin
|
B Pagano, J Amato, J Plavec, J Sponer, L Tomaska, L Trantirek, M Gajarsky, M L Zivkovic, P Stadlbauer, R Fiala |
| 34051 |
2017-05-25 |
Chemical Shifts: 1 set
|
Structure of DNA AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCGAGGG), VK34, oligonucleotide found in regulatory region of the PLEKHG3 human gene |
Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
|
J Plavec, V Kocman |
| 34038 |
2017-09-15 |
Chemical Shifts: 1 set
|
SINEB2 element of the long non-coding RNA activator of translation AS Uchl1 |
Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1
|
C Bon, F Fasolo, G Bussi, J Plavec, L Cimatti, P Carninci, P Podbevsek, S Gustincich, S Reisser, S Zucchelli |
| 34034 |
2018-06-07 |
Chemical Shifts: 1 set
|
A two-quartet G-quadruplex formed by human telomere in KCl solution at neutral pH |
Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere
|
B Wang, J Plavec, P Galer, P Sket |
| 34035 |
2018-01-11 |
Chemical Shifts: 1 set
|
A two-quartet G-quadruplex formed by human telomere in KCl solution at pH 5.0 |
Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere
|
B Wang, J Plavec, P Galer, P Sket |
| 34026 |
2016-09-09 |
Chemical Shifts: 1 set
|
NMR solution structure of human FNIII domain 2 of NCAM |
The N Terminus of the Prion Protein Mediates Functional Interactions with the Neuronal Cell Adhesion Molecule (NCAM) Fibronectin Domain
|
B Zupancic, G Giachin, G Ilc, G Legname, G Salzano, I Biljan, J Plavec, L Amin, R NN Abskharon, U Slapsak |
| 34025 |
2016-09-09 |
Chemical Shifts: 1 set
|
G-Quadruplex formed at the 5'-end of NHEIII_1 Element in human c-MYC promoter bound to triangulenium based fluorescence probe DAOTA-M2 |
NMR Structure of a Triangulenium-Based Long-Lived Fluorescence Probe Bound to a G-Quadruplex.
|
A Kotar, A Shivalingam, B Wang, J Gonzalez-Garcia, J Plavec, R Vilar |
| 25596 |
2015-09-21 |
Chemical Shifts: 1 set
|
Structure of DNA G-quadruplex adopted by ALS and FTD related GGGGCC repeat with G21 to Br-G21 substitution |
Solution structure of a DNA quadruplex containing ALS and FTD related GGGGCC repeat stabilized by 8-bromodeoxyguanosine substitution
|
J Brcic, J Plavec |
| 6307 |
2004-12-06 |
Chemical Shifts: 2 sets
|
The Solution Structure of d(G3T4G4)2 |
d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions
|
J Plavec, M Crnugelj, P Sket |
