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Entry ID	Original Release date	Data summary	Entry Title	Citation Title	Authors
52919	2025-07-22	Chemical Shifts: 1 set	NMR assignments of the Fc fragment of human immunoglobulin G1 glycoprotein non-fucosylated, galactosylated (G2) glycoform	Exploring Glycoform-Dependent Dynamic Modulations in the Fc Region of Human Immunoglobulin G via Computational and Experimental Approaches	Hirokazu Yagi, Koichi Kato, Masayoshi Onitsuka, Miyuki Iwasaki, Sachiko Kondo, Saeko Yanaka, Takumi Yamaguchi, Yohei Miyanoiri, Yoshitake Sakae, Yukiko Isono
52921	2025-07-22	Chemical Shifts: 1 set	NMR assignments of the Fc fragment of human immunoglobulin G1 glycoprotein non-fucosylated, non-galactosylated (G0) glycoform-2	Exploring Glycoform-Dependent Dynamic Modulations in the Fc Region of Human Immunoglobulin G via Computational and Experimental Approaches	Hirokazu Yagi, Koichi Kato, Masayoshi Onitsuka, Miyuki Iwasaki, Sachiko Kondo, Saeko Yanaka, Takumi Yamaguchi, Yohei Miyanoiri, Yoshitake Sakae, Yukiko Isono
52917	2025-07-22	Chemical Shifts: 1 set	NMR assignments of the Fc fragment of human immunoglobulin G1 glycoprotein fucosylated, non-galactosylated (FG0) glycoform	Exploring Glycoform-Dependent Dynamic Modulations in the Fc Region of Human Immunoglobulin G via Computational and Experimental Approaches	Hirokazu Yagi, Koichi Kato, Masayoshi Onitsuka, Miyuki Iwasaki, Sachiko Kondo, Saeko Yanaka, Takumi Yamaguchi, Yohei Miyanoiri, Yoshitake Sakae, Yukiko Isono
52918	2025-07-22	Chemical Shifts: 1 set	NMR assignments of the Fc fragment of human immunoglobulin G1 glycoprotein fucosylated, galactosylated (FG2) glycoform	Exploring Glycoform-Dependent Dynamic Modulations in the Fc Region of Human Immunoglobulin G via Computational and Experimental Approaches	Hirokazu Yagi, Koichi Kato, Masayoshi Onitsuka, Miyuki Iwasaki, Sachiko Kondo, Saeko Yanaka, Takumi Yamaguchi, Yohei Miyanoiri, Yoshitake Sakae, Yukiko Isono
51541	2023-06-30	Chemical Shifts: 1 set	Staphylococcus Aureus Protein A, Immunoglobulin-binidng B domain	The B domain of protein A retains residual structures in 6 M guanidinium chloride as revealed by hydrogen/deuterium-exchange NMR spectroscopy	Koichi Kato, Kunihiro Kuwajima, Maho Yagi-Utsumi, Saeko Yanaka
51059	2022-03-11	Chemical Shifts: 1 set	NMR assignments of the Fc fragment of human immunoglobulin G1 glycoprotein non-fucosylated, non-galactosylated (G0) glycoform	Glutamine-free mammalian expression of recombinant glycoproteins with uniform isotope labeling: an application for NMR analysis of pharmaceutically relevant Fc glycoforms of human immunoglobulin G1	Hirokazu Yagi, Koichi Kato, Masayoshi Onitsuka, Rina Yogo, Saeko Yanaka
36420	2025-11-01	Chemical Shifts: 1 set Molecule Interaction Chemical Shift Values: 4 sets	Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.	Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.	E Nojiri, H Ogasawa, H Yagi, I Shimada, I Yutaka, M Okada, P Guentert, S Rajesh, T Ikeya, T Kigawa, T Kohno, T Mikawa, T Ueda, Y Tateishi
27844	2019-05-22	Chemical Shifts: 1 set	Backbone 1H and 15N Chemical Shift Assignments for Proteasome Assembling Chaperone 3	Molecular and Structural Basis of the Proteasome alpha Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer	Eiji Kurimoto, Keiji Tanaka, Kenta Okamoto, Koichi Kato, Maho Yagi-Utsumi, Tadashi Satoh
27208	2017-10-18	Chemical Shifts: 1 set	Fc fragment of mouse immunoglobulin G	NMR Detection of Semi-Specific Antibody Interactions in Serum Environments.	Hirokazu Yagi, Koichi Kato, Masanori Noda, Rina Yogo, Saeko Yanaka, Susumu Uchiyama, Toshio Yamazaki
26648	2018-06-27	Chemical Shifts: 1 set	FVO Plasmodium falciparum AMA1	Solution NMR characterization of apical membrane antigen 1 and small molecule interactions as a basis for designing new antimalarials	Bankala Krishnarjuna, Cael O Debono, Christopher A MacRaild, Garima Jaipuria, Hanudatta S Atreya, Hiromasa Yagi, Indu R Chandrashekaran, Martin J Scanlon, Peter J Scammells, Raymond Lam, Raymond S Norton, San Sui S Lim, Shane M Devine
25481	2016-11-02	Chemical Shifts: 1 set	Backbone 1H, 13C and 15N chemical shift assignment for perforin C2 quad mutant	Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes	Eleanor WW Leung, Hiromasa Yagi, James C Whisstock, Paul J Conroy, Raymond S Norton, Ruby H Law
25224	2014-10-16	Chemical Shifts: 1 set	Backbone 1H, 13C, and 15N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein	Backbone 1H, 13C, and 15N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein	Hirokazu Yagi, Koichi Kato, Maho Yagi-Utsumi, Shigeru Iida, Takumi Yamaguchi, Ying Zhang
19446	2013-09-19	Chemical Shifts: 1 set	Single-stranded DNA binding protein from E. coli (SSB)	Bound or Free: Interaction of the C-Terminal Domain of Escherichia coli Single-Stranded DNA-Binding Protein (SSB) with the Tetrameric Core of SSB.	Claire E Mason, Dmitry Shishmarev, Gottfried Otting, Hiromasa Yagi, Marylene Vandevenne, Nicholas E Dixon, Paul J Smith, Xun-Cheng Su, Yao Wang
11526	2013-10-04	Chemical Shifts: 1 set	Backbone 1H, 13C, and 15N assignments of yeast Ump1, an intrinsically disordered protein operating as proteasome assembly chaperone	Backbone 1H, 13C, and 15N assignments of yeast Ump1, an intrinsically disordered protein that functions as a proteasome assembly chaperone.	Hirokazu Yagi, Keiji Tanaka, Keisuke Okawa, Koichi Kato, Maho Yagi-Utsumi, Olivier Serve, Tsunehiro Mizushima, Yasushi Saeki, Yoshinori Uekusa, Yuki Nakagawa
11505	2013-03-25	Chemical Shifts: 1 set	Alternative structure of Ubiquitin	Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin	Kenji Sugase, Koichi Kato, Maho Yagi-Utsumi, Mike Williamson, Nicky Baxter, Ryo Kitahara, Soichiro Kitazawa, Tomoshi Kameda
18391	2012-10-22	Chemical Shifts: 3 sets	Solution structure of the R3H domain from human Smubp-2 in complex with 2'-deoxyguanosine-5'-monophosphate	Structural Basis for 5'-End-Specific Recognition of Single-Stranded DNA by the R3H Domain from Human Smubp-2	Bim Graham, Dmitry Zhulenkovs, Edvards Liepinsh, Gottfried Otting, Hiromasa Yagi, Kristaps Jaudzems, Xinying Jia
17959	2011-12-12	Chemical Shifts: 1 set	Backbone and side chain 1H, 13C, and 15N assignments of the ubiquitin-like domain of human HOIL-1L	Backbone and side chain 1H, 13C, and 15N assignments of the ubiquitin-like domain of human HOIL-1L, an essential component of linear ubiquitin chain assembly complex.	Eiji Kurimoto, Eri Sakata, Fuminori Tokunaga, Hiroaki Sasakawa, Hirokazu Yagi, Kazuhiro Iwai, Koichi Kato, Serve Olivier, Syunsuke Mimura, Yoshinori Uekusa
11074	2011-06-03	Chemical Shifts: 1 set	Chemical shifts assignment for the segmentally labelled beta subunit (391-473 residues) of the F1-ATPase in the F1 complex	Analysis of the open and closed conformations of the beta subunits in thermophilic F1-ATPase by solution NMR.	Hideo Akutsu, Hiromasa Yagi, Masasuke Yoshida, Masumi Kobayashi, Toshiharu Suzuki
11062	2010-01-11	Chemical Shifts: 1 set	Solution structure of mouse lipocalin-type prostaglandin D synthase possessing a intrinsic disulfide bond.	Structural analysis of lipocalin-type prostaglandin D synthase complexed with biliverdin by small-angle X-ray scattering and multi-dimensional NMR	Ayano Fukuhara, Katsuaki Inoue, Mao Yamada, Naoto Yagi, Shigenori Nishimura, Shigeru Shimamoto, Tadayasu Ohkubo, Takashi Inui, Takuya Yoshida, Yoshihiro Urade, Yuya Miyamoto
11057	2012-07-19	Chemical Shifts: 1 set	MICROTUBULE BINDING DOMAIN OF DYNEIN-C	Structure of the Microtubule-Binding Domain of Flagellar Dynein	K Yura, M Tanokura, R Kamiya, S Burgess, S Harris, S Honda, S Ohki, T Yagi, Y Kato, Y Shimizu
11053	2009-07-14	Chemical Shifts: 1 set	Chemical shifts assignment for the West Nile virus NS2B(K96A)-NS3 protease	NMR study of complexes between low molecular mass inhibitors and the West Nile virus NS2B-NS3 protease	Amedeo Caflisch, Danzhi Huang, Dariusz Ekonomiuk, Daying Wen, Gottfried Otting, Hiromasa Yagi, Kiyoshi Ozawa, Sebastian Sonntag, Siew P Lim, Subhash G Vasudevan, Thomas H Keller, Xun-Cheng Su
15607	2008-11-25	Chemical Shifts: 1 set	Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis	Structure of the putative 32 kDa myrosinase-binding protein from Arabidopsis (At3g16450.1) determined by SAIL-NMR.	Akira M Ono, David J Aceti, Hirokazu Yagi, John L Markley, Jungoo Jee, Koichi Kato, Masatsune Kainosho, Mitsuhiro Takeda, Nozomi Sugimori, Peter Guntert, Takuya Torizawa, Teppei Ikeya, Tsutomu Terauchi, Yoshiki Yamaguchi
11000	2008-02-20	Chemical Shifts: 1 set	C-Terminal Domain of Epsilon Subunit of F1F0-ATP Synthase from The Thermophilic Bacillus PS3 WITH ATP	Structures of the thermophilic F1-ATPase epsilon subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1.	Hideaki Tanaka, Hideo Akutsu, Hiromasa Yagi, Masasuke Yoshida, Nobumoto Kajiwara, Tomitake Tsukihara, Yasuyuki Kato-Yamada
10052	2007-06-13	Chemical Shifts: 2 sets	characterization of PCP-0SH in the D1 state was examined by using H/D exchange experiments.	Characterization of the denatured structure of pyrrolidone carboxyl peptidase from a hyperthermophile under non-denaturing conditions: Role of the C-terminal a-helix of the protein in folding and stability	Hideo Akutsu, Hiromasa Yagi, Katsuhide Yutani, Kyoko Ogasahara, Makoto Takeuchi, Mineyuki Mizuguchi, Satoshi Iimura, Shin-ichi Segawa, Taro Umezaki, Yasuo Noda
6405	2005-12-15	Chemical Shifts: 1 set	Backbone 1H, 13C, and 15N Chemical Shift Assignments for the first cadherin domain of Cadherin-related neuronal receptor(CNR)/ Protocadherin alpha	Letter to the Editor: 1H, 13C and 15N resonance assignments of the first cadherin domain of Cadherin-related neuronal receptor (CNR)/protocadherin alpha.	Hideo Akutsu, Hirofumi Morishita, Keiko Udaka, Masataka Umitsu, Takahisa Ikegami, Takeshi Yagi, Yoji Murata
5886	2005-05-03	Chemical Shifts: 1 set	Backbone 1H, 13C and 15N Chemical Shift Assignments for TF1 bata subunit	Conformational change of H+-ATPase beta monomer revealed on segmental isotope labeling NMR spectroscopy	Hideo Akutsu, Hiromasa Yagi, Masasuke Yoshida, Toshio Yamazaki, T Tsujimoto
5730	2003-05-19	Chemical Shifts: 3 sets	1H Chemical Shift Assignments for a DNA Duplex with N6-Deoxyadenosine Adduct of (9S,10R)-9,10-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene	Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex	Bruce A Luxon, David E Volk, David G Gorenstein, Donald M Jerina, Haruhiko Yagi, Herman JC Yeh, Jamshed H Shah, Jane M Sayer, Jeffrey S Rice, Varatharasa Thiviyanathan
5484	2002-12-23	Chemical Shifts: 1 set	Backbone NMR assignments of the metal-free UreE from Bacillus pasteurii	Letter to the Editor: Backbone NMR assignments of the metal-free UreE from Bacillus pasteurii	Bong-Jin Lee, H Akutsu, Hee-Chul Ahn, H Yagi, Hyung-Sik Won, Sangho Park, Yeon-Hee Lee
750	1995-07-31	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Mikiharu Yoshida, Sakae Tsuda, Yasushi Hasegawa
2435	Unknown	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
2436	Unknown	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
2437	Unknown	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
2438	1999-06-14	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
2439	1999-06-14	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
2440	1999-06-14	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Studies on Calmodulin: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Michio Yazawa, Mitsuhiko Ikura, Toshiaki Mikuni, Toshifumi Hiraoki
258	1995-07-31	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Mikiharu Yoshida, Sakae Tsuda, Yasushi Hasegawa
259	1995-07-31	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Mikiharu Yoshida, Sakae Tsuda, Yasushi Hasegawa
676	1995-07-31	Chemical Shifts: 1 set	1H NMR Study of Rabbit Skeletal Muscle Troponin C: Mg2+-Induced Conformational Change	1H NMR Study of Rabbit Skeletal Muscle Troponin C: Mg2+-Induced Conformational Change	Kenji Ogura, Koichi Yagi, Kunio Hikichi, Sakae Tsuda, Yasushi Hasegawa
677	1995-07-31	Chemical Shifts: 1 set	1H NMR Study of Rabbit Skeletal Muscle Troponin C: Mg2+-Induced Conformational Change	1H NMR Study of Rabbit Skeletal Muscle Troponin C: Mg2+-Induced Conformational Change	Kenji Ogura, Koichi Yagi, Kunio Hikichi, Sakae Tsuda, Yasushi Hasegawa
749	1995-07-31	Chemical Shifts: 1 set	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Nuclear Magnetic Resonance Study on Rabbit Skeletal Troponin C: Calcium-Induced Conformational Change	Koichi Yagi, Kunio Hikichi, Mikiharu Yoshida, Sakae Tsuda, Yasushi Hasegawa