BMRB Entry 4342
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4342
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Musco, Giovanna; de Tommasi, Tina; Stier, Gunter; Kolmerer, Bernhard; Bottomle, Matthew; Adinolfi, Salvatore; Musket, Frederick; Gibson, Toby; Frenkiel, Tom; Pastore, Annalisa. "Assignment of the 1H, 15N, and 13C Resonances of the C-terminal Domain of
Frataxin, the Protein Involved in Friedreich Ataxia." J. Biomol. NMR 15, 87-88 (1999).
Assembly members:
Frataxin, polymer, 122 residues, 14683 Da.
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Frataxin: PMDETTYERLAEETLDSLAE
FFEDLADKPYTFEDYDVSFG
SGVLTVKLGGDLGTYVINKQ
TPNKQIWLSSPSSGPKRYDW
TGKNWVYSHDGVSLHELLAA
ELTKALKTKLDLSSLAYSGK
DA
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 485 |
| 15N chemical shifts | 125 |
| 1H chemical shifts | 853 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Frataxin | 1 |
Entities:
Entity 1, Frataxin 122 residues - 14683 Da.
| 1 | PRO | MET | ASP | GLU | THR | THR | TYR | GLU | ARG | LEU | ||||
| 2 | ALA | GLU | GLU | THR | LEU | ASP | SER | LEU | ALA | GLU | ||||
| 3 | PHE | PHE | GLU | ASP | LEU | ALA | ASP | LYS | PRO | TYR | ||||
| 4 | THR | PHE | GLU | ASP | TYR | ASP | VAL | SER | PHE | GLY | ||||
| 5 | SER | GLY | VAL | LEU | THR | VAL | LYS | LEU | GLY | GLY | ||||
| 6 | ASP | LEU | GLY | THR | TYR | VAL | ILE | ASN | LYS | GLN | ||||
| 7 | THR | PRO | ASN | LYS | GLN | ILE | TRP | LEU | SER | SER | ||||
| 8 | PRO | SER | SER | GLY | PRO | LYS | ARG | TYR | ASP | TRP | ||||
| 9 | THR | GLY | LYS | ASN | TRP | VAL | TYR | SER | HIS | ASP | ||||
| 10 | GLY | VAL | SER | LEU | HIS | GLU | LEU | LEU | ALA | ALA | ||||
| 11 | GLU | LEU | THR | LYS | ALA | LEU | LYS | THR | LYS | LEU | ||||
| 12 | ASP | LEU | SER | SER | LEU | ALA | TYR | SER | GLY | LYS | ||||
| 13 | ASP | ALA |
Samples:
sample_one: Frataxin, [U-95% 13C; U-90% 15N], 1.0 mM
sample_conditions: pH: 6.8 na; temperature: 300 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-1H -15N NOESY | not available | not available | not available |
| 13C-1H-1H NOESY | not available | not available | not available |
| 3D 1H-13C-1HHCCH-TOCSY | not available | not available | not available |
| 3D HNCA | not available | not available | not available |
| 3D HN(CO)CA | not available | not available | not available |
| 3D CBCA(CO)NH | not available | not available | not available |
| 3D HNCACB | not available | not available | not available |
| 3D HNHA | not available | not available | not available |
| 3D HNHB | not available | not available | not available |
Software:
No software information available
NMR spectrometers:
- Varian Unity plus 600 MHz
- Varian Unity plus 500 MHz
- Bruker DMX 500 MHz
Related Database Links:
| BMRB | 15233 15234 15235 15736 15906 16581 |
| PDB | |
| GB | AAA98508 AAA98509 AAA98510 AAH23633 AAH48097 |
| REF | NP_000135 NP_001155178 NP_001247670 NP_852090 XP_001137864 |
| SP | Q16595 |
| AlphaFold | Q16595 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks