BMRB Entry 11358

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PDB ID: 2e61
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR11358
MolProbity Validation Chart

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Title:
Assigned chemical shifts of the zf-CW domain with H3 peptide
Deposition date:
2010-09-07
Original release date:
2011-01-04
Authors:
He, F.; Muto, Y.; Inoue, M.; Kigawa, T.; Shirouzu, M.; Terada, T.; Yokoyama, S.
Citation:

Citation: He, Fahu; Umehara, Takashi; Saito, Kohei; Harada, Takushi; Watanabe, Satoru; Yabuki, Takashi; Kigawa, Takanori; Takahashi, Mari; Kuwasako, Kanako; Tsuda, Kengo; Matsuda, Takayoshi; Aoki, Masaaki; Seki, Eiko; Kobayashi, Naohiro; Guntert, Peter; Yokoyama, Shigeyuki; Muto, Yutaka. "Structural insight into the zinc finger CW domain as a histone modification reader."  Structure 18, 1127-1139 (2010).
PubMed: 20826339

Assembly members:

Assembly members:
zf-CW domain, polymer, 69 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.
H3 peptide, polymer, 20 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: E. coli - cell free   Vector: P060116-12

Entity Sequences (FASTA):

Entity Sequences (FASTA):
zf-CW domain: GSSGSSGEISGFGQCLVWVQ CSFPNCGKWRRLCGNIDPSV LPDNWSCDQNTDVQYNRCDI PEETWTGLE
H3 peptide: ARTKQTARKSTGGKAPRKQL

Data sets:
Data typeCount
15N chemical shifts56
1H chemical shifts56

Additional metadata:

  • Assembly
  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1zf-CW domain1
2ZINC ION2
3H3 peptide3

Entities:

Entity 1, zf-CW domain 69 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYGLUILESER
2   GLYPHEGLYGLNCYSLEUVALTRPVALGLN
3   CYSSERPHEPROASNCYSGLYLYSTRPARG
4   ARGLEUCYSGLYASNILEASPPROSERVAL
5   LEUPROASPASNTRPSERCYSASPGLNASN
6   THRASPVALGLNTYRASNARGCYSASPILE
7   PROGLUGLUTHRTRPTHRGLYLEUGLU

Entity 2, ZINC ION - Zn - 65.409 Da.

1   ZN

Entity 3, H3 peptide 20 residues - Formula weight is not available

1   ALAARGTHRLYSGLNTHRALAARGLYSSER
2   THRGLYGLYLYSALAPROARGLYSGLNLEU

Related Database Links:

BMRB 11115 11359 11360 11361 11362 16694 16878 18385
PDB 2E61 2RR4 1EQZ 1F66 1HQ3 1ID3 1KX3 1KX4 1KX5 1M18 1M19 1M1A 1P34 1P3A 1P3B 1P3F 1P3G 1P3I 1P3K 1P3L 1P3M 1P3O 1P3P 1PU9 1S32 1TZY 1U35 1ZBB 1ZLA 2ARO 2CV5 2F8N 2FJ7 2HIO 2IO5 2KFT 2KWK 2NQB 2NZD 2PYO 2YBA 3A1B 3A6N 3AFA 3AV1 3AV2 3AYW 3AZE 3AZF 3AZG 3AZH 3AZI 3AZJ 3AZK 3AZL 3AZM 3AZN 3B6F 3B6G 3C1B 3C1C 3C9K 3KUY 3KXB 3LEL 3LJA 3LZ0 3LZ1 3MGP 3MGQ 3MGR 3MGS 3MNN 3MVD 3O62 3REH 3REI 3REJ 3REK 3REL 3TU4 3UT9 3UTA 3UTB 3W96 3W97 3W99 3WA9 3WAA 3WKJ 3WTP 4H9N 4H9O 4H9P 4H9Q 4H9R 4H9S 4HGA 4J8U 4J8V 4J8W 4J8X 4JJN 4KGC 4KUD 4LD9 4LK9 4R8P
DBJ BAA91424 BAC04028 BAG62414 BAG63489 BAA20144 BAA21441 BAA31218 BAA81840 BAA81841
EMBL CAB66669 CAA17819 CAA23780 CAA24375 CAA24647 CAA24952
GB AAH02725 AIC60275 EAW76538 EAW76539 EAW76540 AAA19824 AAA29441 AAA29965 AAA30003 AAA30026
REF NP_001244937 NP_060454 XP_002803268 XP_003318693 XP_003318694 NP_001005101 NP_001005464 NP_001013074 NP_001013721 NP_001014411
SP Q9H0M4 A1CP80 A1D240 A2QRR5 A2XHJ3 A2Y533
PIR A56580 A56618 A56654 I37460 I48113
PRF 0710252A 0806228A 1202262D 1202289A 1303352A
TPE CBF88887
TPG DAA07131 DAA10514 DAA16173 DAA16175 DAA16178
AlphaFold Q9H0M4 A1CP80 A1D240 A2QRR5 A2XHJ3 A2Y533

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