BMRB Entry 7250

Name: Backbone 1H, 13C, 15N Chemical Shift Assignments for HIV-1 unmyristoylated matrix protein
Published: 2006-08-15

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7250

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, 15N Chemical Shift Assignments for HIV-1 unmyristoylated matrix protein

Deposition date:

2006-08-04

Original release date:

2006-08-15

Authors:

Saad, Jamil; Miller, Jaime; Tai, Janet; Kim, Andrew; Ghanam, Ruba; Summers, Michael

Citation:

Citation: Saad, Jamil; Miller, Jaime; Tai, Janet; Kim, Andrew; Ghanam, Ruba; Summers, Michael. "Structural Basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly" Proc. Natl. Acad. Sci. U.S.A. 103, 11364-11369 (2006).
PubMed: 16840558

Assembly members:

Assembly members:
Matrix protein, polymer, 131 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Matrix protein: GARASVLSGGELDKWEKIRL RPGGKKQYKLKHIVWASREL ERFAVNPGLLETSEGCRQIL GQLQPSLQTGSEELRSLYNT IAVLYCVHQRIDVKDTKEAL DKIEEEQNKSKKKAQQAAAD TGNNSQVSQNY

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	429
15N chemical shifts	131
1H chemical shifts	782

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HIV-1 unmyristoylated Matrix	1

Entities:

Entity 1, HIV-1 unmyristoylated Matrix 131 residues - Formula weight is not available

1

GLY

ALA

ARG

ALA

SER

VAL

LEU

SER

GLY

2

GLU

LEU

ASP

LYS

TRP

GLU

LYS

ILE

ARG

LEU

3

ARG

PRO

GLY

LYS

GLN

TYR

LYS

LEU

4

LYS

HIS

ILE

VAL

TRP

ALA

SER

ARG

GLU

LEU

5

GLU

ARG

PHE

ALA

VAL

ASN

PRO

GLY

LEU

6

GLU

THR

SER

GLU

GLY

CYS

ARG

GLN

ILE

LEU

7

GLY

GLN

LEU

GLN

PRO

SER

LEU

GLN

THR

GLY

8

SER

GLU

LEU

ARG

SER

LEU

TYR

ASN

THR

9

ILE

ALA

VAL

LEU

TYR

CYS

VAL

HIS

GLN

ARG

10

ILE

ASP

VAL

LYS

ASP

THR

LYS

GLU

ALA

LEU

11

ASP

LYS

ILE

GLU

GLN

ASN

LYS

SER

12

LYS

ALA

GLN

ALA

ASP

13

THR

GLY

ASN

SER

GLN

VAL

SER

GLN

ASN

14

TYR

Samples:

sample_1: Matrix protein, [U-15 N; U-13 C], 0.5 mM

conditions_1: pH: 5.5; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	not available	conditions_1
3D 15N-edited NOESY	sample_1	not available	conditions_1
13C-edited NOESY	sample_1	not available	conditions_1
4D 15N,13C-edited NOESY	sample_1	not available	conditions_1
4D 13C,13C-edited NOESY	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 600 MHz
Bruker DRX 800 MHz

BMRB	15114 15116 18715 18716 5316 5960 7267 7275 7309
PDB	1HIW 1L6N 1UPH 2GOL 2H3F 2H3I 2H3Q 2H3V 2H3Z 2HMX 2JMG 2LYA 2LYB 2NV3 4JMU
DBJ	BAF34641 BAG48474
EMBL	CBI61180 CBI61181 CBI61182 CBI61183 CBI61184
GB	AAA44987 AAB00898 AAB60571 AAC28445 AAC29216
SP	P12493 P12497
AlphaFold	P12493 P12497