BMRB Entry 6855

Name: Sequence specific assignment of SH3 domain B from human CIN85 protein
Published: 2005-10-20

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6855

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence specific assignment of SH3 domain B from human CIN85 protein

Deposition date:

2005-10-07

Original release date:

2005-10-20

Authors:

Ababou, Abdessamad; Ladbury, John; Pfuhl, Mark

Citation:

Citation: Ababou, Abdessamad; Ladbury, John; Pfuhl, Mark. "Sequence specific assignment of SH3 domain B from human CIN85 protein" The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
CIN85_B, polymer, 92 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CIN85_B: SMTGGQQMGTNKRGERRRRR CQVAFSYLPQNDDELELKVG DIIEVVGEVEEGWWEGVLNG KTGMFPSNFIKELSGESDEL GISQLEHHHHHH

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	218
15N chemical shifts	76
1H chemical shifts	429

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CIN85 B domain	1

Entities:

Entity 1, CIN85 B domain 92 residues - Formula weight is not available

1

SER

MET

THR

GLY

GLN

MET

GLY

THR

2

ASN

LYS

ARG

GLY

GLU

ARG

3

CYS

GLN

VAL

ALA

PHE

SER

TYR

LEU

PRO

GLN

4

ASN

ASP

GLU

LEU

GLU

LEU

LYS

VAL

GLY

5

ASP

ILE

GLU

VAL

GLY

GLU

VAL

GLU

6

GLU

GLY

TRP

GLU

GLY

VAL

LEU

ASN

GLY

7

LYS

THR

GLY

MET

PHE

PRO

SER

ASN

PHE

ILE

8

LYS

GLU

LEU

SER

GLY

GLU

SER

ASP

GLU

LEU

9

GLY

ILE

SER

GLN

LEU

GLU

HIS

10

HIS

Samples:

sample_1: CIN85 B domain, [U-15N], 1 ± 0.15 mM; PO4, no, 20 mM; NaCl, no, 100 mM; EDTA, no, 1 mM; DTT, no, 2 mM; NaN3, no, 0.01%

sample_2: CIN85 B domain, [U-15N; U-13C], 1.0 ± 0.15 ; PO4, no, 20 mM; NaCl, no, 100 mM; EDTA, no, 1 mM; DTT, no, 2 mM; NaN3, no, 0.01%

conditions_1: ionic strength: 0.1 M; pH: 6.3; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D_1H-15N_HSQC	sample_1	not available	conditions_1
3D_1H-1H-15N_TOCSY	sample_1	not available	conditions_1
3D_1H-1H-15N_NOESY	sample_1	not available	conditions_1
2D_1H-13C_HSQC	sample_2	not available	conditions_1
3D_CBCANH	sample_2	not available	conditions_1
3D_CBCA(CO)NH	sample_2	not available	conditions_1
3D_HBHACBCANH	sample_2	not available	conditions_1
3D_HBHACBCA(CO)NH	sample_2	not available	conditions_1
3D_1H-13C-1H_HCCH-COSY	sample_2	not available	conditions_1
3D_1H-13C-1H_HCCH-TOCSY	sample_2	not available	conditions_1
3D_13C-1H-1H_NOESY	sample_2	not available	conditions_1
3D_HNCO	sample_2	not available	conditions_1
3D_13C-1H-1H_TOCSY_Aromatics	sample_2	not available	conditions_1
3D_13C-1H-1H_NOESY_Aromatics	sample_2	not available	conditions_1

Software:

NMRPipe v290302 - Data processing

ANSIG v3.3 - NMR assignments

software_1 - NMR assignments

NMR spectrometers:

BRUKER AVANCE 600 MHz
BRUKER AVANCE 500 MHz

BMRB	11179
PDB	1WI7 2O2O