BMRB Entry 6468
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6468
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Vogtherr, Martin; Saxena, Krishna; Grimme, Susanne; Betz, Marco; Schieborr, Ulrich; Pescatore, Barbara; Langer, Thomas; Schwalbe, Harald. "NMR backbone assignment of the mitogen-activated protein (MAP) kinase p38" J. Biomol. NMR 32, 175-175 (2005).
Assembly members:
mitogen-activated protein kinase p38 alpha, polymer, 351 residues, Formula weight is not available
Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
mitogen-activated protein kinase p38 alpha: GHNSQERPTFYRQELNKTIW
EVPERYQNLSPVGSGAYGSV
CAAFDTKTGHRVAVKKLSRP
FQSIIHAKRTYRELRLLKHM
KHENVIGLLDVFTPARSLEE
FNDVYLVTHLMGADLNNIVK
CQKLTDDHVQFLIYQILRGL
KYIHSADIIHRDLKPSNLAV
NEDCELKILDFGLARHTDDE
MTGYVATRWYRAPEIMLNWM
HYNQTVDIWSVGCIMAELLT
GRTLFPGTDHIDQLKLILRL
VGTPGAELLKKISSESARNY
IQSLAQMPKMNFANVFIGAN
PLAVDLLEKMLVLDSDKRIT
AAQALAHAYFAQYHDPDDEP
VADPYDQSFESRDLLIDEWK
SLTYDEVISFV
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 219 |
| 13C chemical shifts | 684 |
| 15N chemical shifts | 219 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | p38 alpha | 1 |
Entities:
Entity 1, p38 alpha 351 residues - Formula weight is not available
| 1 | GLY | HIS | ASN | SER | GLN | GLU | ARG | PRO | THR | PHE | ||||
| 2 | TYR | ARG | GLN | GLU | LEU | ASN | LYS | THR | ILE | TRP | ||||
| 3 | GLU | VAL | PRO | GLU | ARG | TYR | GLN | ASN | LEU | SER | ||||
| 4 | PRO | VAL | GLY | SER | GLY | ALA | TYR | GLY | SER | VAL | ||||
| 5 | CYS | ALA | ALA | PHE | ASP | THR | LYS | THR | GLY | HIS | ||||
| 6 | ARG | VAL | ALA | VAL | LYS | LYS | LEU | SER | ARG | PRO | ||||
| 7 | PHE | GLN | SER | ILE | ILE | HIS | ALA | LYS | ARG | THR | ||||
| 8 | TYR | ARG | GLU | LEU | ARG | LEU | LEU | LYS | HIS | MET | ||||
| 9 | LYS | HIS | GLU | ASN | VAL | ILE | GLY | LEU | LEU | ASP | ||||
| 10 | VAL | PHE | THR | PRO | ALA | ARG | SER | LEU | GLU | GLU | ||||
| 11 | PHE | ASN | ASP | VAL | TYR | LEU | VAL | THR | HIS | LEU | ||||
| 12 | MET | GLY | ALA | ASP | LEU | ASN | ASN | ILE | VAL | LYS | ||||
| 13 | CYS | GLN | LYS | LEU | THR | ASP | ASP | HIS | VAL | GLN | ||||
| 14 | PHE | LEU | ILE | TYR | GLN | ILE | LEU | ARG | GLY | LEU | ||||
| 15 | LYS | TYR | ILE | HIS | SER | ALA | ASP | ILE | ILE | HIS | ||||
| 16 | ARG | ASP | LEU | LYS | PRO | SER | ASN | LEU | ALA | VAL | ||||
| 17 | ASN | GLU | ASP | CYS | GLU | LEU | LYS | ILE | LEU | ASP | ||||
| 18 | PHE | GLY | LEU | ALA | ARG | HIS | THR | ASP | ASP | GLU | ||||
| 19 | MET | THR | GLY | TYR | VAL | ALA | THR | ARG | TRP | TYR | ||||
| 20 | ARG | ALA | PRO | GLU | ILE | MET | LEU | ASN | TRP | MET | ||||
| 21 | HIS | TYR | ASN | GLN | THR | VAL | ASP | ILE | TRP | SER | ||||
| 22 | VAL | GLY | CYS | ILE | MET | ALA | GLU | LEU | LEU | THR | ||||
| 23 | GLY | ARG | THR | LEU | PHE | PRO | GLY | THR | ASP | HIS | ||||
| 24 | ILE | ASP | GLN | LEU | LYS | LEU | ILE | LEU | ARG | LEU | ||||
| 25 | VAL | GLY | THR | PRO | GLY | ALA | GLU | LEU | LEU | LYS | ||||
| 26 | LYS | ILE | SER | SER | GLU | SER | ALA | ARG | ASN | TYR | ||||
| 27 | ILE | GLN | SER | LEU | ALA | GLN | MET | PRO | LYS | MET | ||||
| 28 | ASN | PHE | ALA | ASN | VAL | PHE | ILE | GLY | ALA | ASN | ||||
| 29 | PRO | LEU | ALA | VAL | ASP | LEU | LEU | GLU | LYS | MET | ||||
| 30 | LEU | VAL | LEU | ASP | SER | ASP | LYS | ARG | ILE | THR | ||||
| 31 | ALA | ALA | GLN | ALA | LEU | ALA | HIS | ALA | TYR | PHE | ||||
| 32 | ALA | GLN | TYR | HIS | ASP | PRO | ASP | ASP | GLU | PRO | ||||
| 33 | VAL | ALA | ASP | PRO | TYR | ASP | GLN | SER | PHE | GLU | ||||
| 34 | SER | ARG | ASP | LEU | LEU | ILE | ASP | GLU | TRP | LYS | ||||
| 35 | SER | LEU | THR | TYR | ASP | GLU | VAL | ILE | SER | PHE | ||||
| 36 | VAL |
Samples:
triple_labeled: mitogen-activated protein kinase p38 alpha, [U-2H; U-13C; U-15N], 0.7 mM; NaCl 150 mM; Hepes*HCl 50 mM; DTT 5 mM; TSP 1 mM
selectively_labeled: mitogen-activated protein kinase p38 alpha, selectively labeled, 0.2 mM
Ex-cond_1: pH: 6.8; temperature: 298 K; ionic strength: 0.3 M
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| Deuterium-decoupled TROSY variants of HNCO | not available | not available | not available |
| HN(CA)CO | not available | not available | not available |
| HNCA | not available | not available | not available |
| HNCACB | not available | not available | not available |
| HN(CO)CACB | not available | not available | not available |
Software:
XEASY - assignment
NMR spectrometers:
- Bruker DRX 800 MHz
Related Database Links:
| BMRB | 17471 17940 19930 19934 19935 19936 19937 |
| PDB | |
| DBJ | BAB85654 BAE21782 BAE30324 BAE31659 BAF84398 |
| EMBL | CAG38743 |
| GB | AAA20888 AAA57456 AAA74301 AAB51285 AAC36131 |
| PRF | 2111247A 2124426A |
| REF | NP_001003206 NP_001136366 NP_001161985 NP_001161986 NP_036081 |
| SP | O02812 P47811 P70618 Q16539 |
| AlphaFold | O02812 P47811 P70618 Q16539 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks