BMRB Entry 4683

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4683

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Multiple Modes of Peptide Recognition by the PTB Domain of the cell fate Determinant Numb

Deposition date:

2000-03-08

Original release date:

2000-06-19

Authors:

Zwahlen, Catherine; Li, Shun-Cheng; Kay, Lewis; Pawson, Tony; Forman-Kay, Julie

Citation:

Citation: Zwahlen, Catherine; Li, Shun-Cheng; Kay, Lewis; Pawson, Tony; Forman-Kay, Julie. "Multiple Modes of Peptide Recognition by the PTB Domain of the cell fate Determinant Numb" EMBO J. 19, 1505-1515 (2000).

Assembly members:

Assembly members:
dNumb PTB, polymer, 171 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Drosophila melanogaster Taxonomy ID: 32346 Superkingdom: Eukaryota Kingdom: not available Genus/species: Drosophila melanogaster

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
dNumb PTB: GSPGIPDRVPESSKPHQWQA DEEAVRSATCSFSVKYLGCV EVFESRGMQVCEEALKVLRQ SRRRPVRGLLHVSGDGLRVV DDETKGLIVDQTIEKVSFCA PDRNHERGFSYICRDGTTRR WMCHGFLACKDSGERLSHAV GCAFAVCLERKQRRTRAAAS GFSNMSFEDFP

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	624
1H chemical shifts	1079
15N chemical shifts	161

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	dNumb PTB	1

Entities:

Entity 1, dNumb PTB 171 residues - Formula weight is not available

1

GLY

SER

PRO

GLY

ILE

PRO

ASP

ARG

VAL

PRO

2

GLU

SER

LYS

PRO

HIS

GLN

TRP

GLN

ALA

3

ASP

GLU

ALA

VAL

ARG

SER

ALA

THR

CYS

4

SER

PHE

SER

VAL

LYS

TYR

LEU

GLY

CYS

VAL

5

GLU

VAL

PHE

GLU

SER

ARG

GLY

MET

GLN

VAL

6

CYS

GLU

ALA

LEU

LYS

VAL

LEU

ARG

GLN

7

SER

ARG

PRO

VAL

ARG

GLY

LEU

8

HIS

VAL

SER

GLY

ASP

GLY

LEU

ARG

VAL

9

ASP

GLU

THR

LYS

GLY

LEU

ILE

VAL

ASP

10

GLN

THR

ILE

GLU

LYS

VAL

SER

PHE

CYS

ALA

11

PRO

ASP

ARG

ASN

HIS

GLU

ARG

GLY

PHE

SER

12

TYR

ILE

CYS

ARG

ASP

GLY

THR

ARG

13

TRP

MET

CYS

HIS

GLY

PHE

LEU

ALA

CYS

LYS

14

ASP

SER

GLY

GLU

ARG

LEU

SER

HIS

ALA

VAL

15

GLY

CYS

ALA

PHE

ALA

VAL

CYS

LEU

GLU

ARG

16

LYS

GLN

ARG

THR

ARG

ALA

SER

17

GLY

PHE

SER

ASN

MET

SER

PHE

GLU

ASP

PHE

18

PRO

Samples:

sample_1: dNumb PTB, [U-95% 13C; U-95% 15N], 1.2 mM

sample_2: dNumb PTB, [U-95% 15N], 1.2 mM

sample_3: dNumb PTB, [U-10% 13C; U-90% 15N], 1.0 mM

cond_1: pH: 6.5; temperature: 303 K; ionic strength: 0.15 M

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N NOESY	not available	not available	cond_1
1H-13C NOESY	not available	not available	cond_1
HNCA	not available	not available	cond_1
HNCACB	not available	not available	cond_1
CBCACONNH	not available	not available	cond_1
HBCBCACONNH	not available	not available	cond_1
CCC-TOCSY-CONNH	not available	not available	cond_1
HCC-TOCSY-CONNH	not available	not available	cond_1
HCCH-TOCSY	not available	not available	cond_1

Software:

NMRPipe - Processing

NMRView - Analysis

NMR spectrometers:

Varian INOVA 600 MHz
Varian INOVA 500 MHz

BMRB	4263
PDB	1DDM 2NMB
GB	AAA28730 AAF52776 AAK93152 AAN10693 ACL68752
REF	NP_001260291 NP_523523 NP_723460 XP_001357245 XP_001964877
SP	P16554
AlphaFold	P16554