BMRB Entry 18080

Click here to enlarge.

PDB ID: 2llm
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18080
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
structure of amyloid precursor protein's transmembrane domain
Deposition date:
2011-11-15
Original release date:
2012-01-25
Authors:
Nadezhdin, Kirill; Bocharova, Olga; Bocharov, Eduard; Arseniev, Alexander
Citation:

Citation: Nadezhdin, Kirill; Bocharova, Olga; Bocharov, Eduard; Arseniev, Alexander. "Structural and Dynamic Study of the Transmembrane Domain of the Amyloid Precursor Protein"  Acta Naturae ., .-. (2010).

Assembly members:

Assembly members:
entity, polymer, 43 residues, 4450.500 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEMEX-1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: GSQKLVFFAEDVGSNKGAII GLMVGGVVIATVIVITLVML KKK

Data sets:
Data typeCount
13C chemical shifts138
15N chemical shifts44
1H chemical shifts273

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1amyloid precursor protein's transmembrane domain1

Entities:

Entity 1, amyloid precursor protein's transmembrane domain 43 residues - 4450.500 Da.

1   GLYSERGLNLYSLEUVALPHEPHEALAGLU
2   ASPVALGLYSERASNLYSGLYALAILEILE
3   GLYLEUMETVALGLYGLYVALVALILEALA
4   THRVALILEVALILETHRLEUVALMETLEU
5   LYSLYSLYS

Related Database Links:

BMRB 15775 18649
PDB 2LLM 2LOH 2LP1 2LZ3 5AEF
DBJ BAA22264 BAA84580 BAB71958 BAC34997 BAC36369
EMBL CAA30050 CAA30488 CAA31830 CAA39589 CAA39590
GB AAA35540 AAA36829 AAA37139 AAA51722 AAA51726
PIR A60045 D60045 E60045 G60045 JH0773
PRF 1303338A 1403400A 1507304A 1507304B 1507304C
REF NP_000475 NP_001005698 NP_001006601 NP_001013036 NP_001070264
SP O73683 P05067 P08592 P12023 P53601
TPG DAA33655
AlphaFold O73683 P05067 P08592 P12023 P53601

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks