BMRB Entry 17246

Title:
Solution structure of the Streptococcus pneumoniae RrgB pilus backbone D1 domain
Deposition date:
2010-10-11
Original release date:
2011-03-30
Authors:
Gentile, Maria Antonietta; Melchiorre, Sara; Emolo, Carla; Moschioni, Monica; Gianfaldoni, Claudia; Pancotto, Laura; Ferlenghi, Ilaria; Scarselli, Maria; Pansegrau, Werner; Veggi, Daniele; Merola, Marcello; Cantini, Francesca; Ruggiero, Paolo; Banci, Lucia; Masignani, Vega
Citation:

Citation: Gentile, Maria Antonietta; Melchiorre, Sara; Emolo, Carla; Moschioni, Monica; Gianfaldoni, Claudia; Pancotto, Laura; Ferlenghi, Ilaria; Scarselli, Maria; Pansegrau, Werner; Veggi, Daniele; Merola, Marcello; Cantini, Francesca; Ruggiero, Paolo; Banci, Lucia; Masignani, Vega. "Structural and Functional Characterization of the Streptococcus pneumoniae RrgB Pilus Backbone D1 Domain."  J. Biol. Chem. 286, 14588-14597 (2011).
PubMed: 21367860

Assembly members:

Assembly members:
DOMAIN_OF_A_CELL_WALL_SURFACE_ANCHOR_FAMILY_PROTEIN, polymer, 181 residues, 18545.027 Da.

Natural source:

Natural source:   Common Name: Streptococcus pneumoniae   Taxonomy ID: 1313   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Streptococcus pneumoniae

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET 21b+

Data sets:
Data typeCount
13C chemical shifts660
15N chemical shifts172
1H chemical shifts1168
heteronuclear NOE values150
order parameters150
T1 relaxation values150
T2 relaxation values150

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1CELL_WALL_SURFACE_ANCHOR1

Entities:

Entity 1, CELL_WALL_SURFACE_ANCHOR 181 residues - 18545.027 Da.

The C-terminal His-tag is removed from the pdb

1   METGLUTHRALASERALAALATHRVALPHE
2   ALAALAGLYTHRTHRTHRTHRSERVALTHR
3   VALHISLYSLEULEUALATHRASPGLYASP
4   METASPLYSILEALAASNGLULEUGLUTHR
5   GLYASNTYRALAGLYASNLYSVALGLYVAL
6   LEUPROALAASNALALYSGLUILEALAGLY
7   VALMETPHEVALTRPTHRASNTHRASNASN
8   GLUILEILEASPGLUASNGLYGLNTHRLEU
9   GLYVALASNILEASPPROGLNTHRPHELYS
10   LEUSERGLYALAMETPROALATHRALAMET
11   LYSLYSLEUTHRGLUALAGLUGLYALALYS
12   PHEASNTHRALAASNLEUPROALAALALYS
13   TYRLYSILETYRGLUILEHISSERLEUSER
14   THRTYRVALGLYGLUASPGLYALATHRLEU
15   THRGLYSERLYSALAVALPROILEGLUILE
16   GLULEUPROLEUASNASPVALVALASPALA
17   HISVALTYRPROLYSASNTHRGLUALALYS
18   PROLYSILELEUGLUHISHISHISHISHIS
19   HIS

Related Database Links:

PDB 2L4O 2Y1V 3RPK
EMBL CEO70617 CEV45859 CEV80893 CEV87170 CEV93515
GB AAK74623 ABS82086 ABS82156 ACO23362 ADI68988
REF WP_000836216 WP_000836217 WP_000836218 WP_000836219 WP_000836220

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks