BMRB Entry 17215

Title:
13C NMR Spectroscopic and X-ray Crystallographic Study of the Role Played by Mitochondrial Cytochrome b5 Heme Propionates in the Electrostatic Binding to Cytochrome c
Deposition date:
2010-09-29
Original release date:
2010-11-10
Authors:
Rodriguez-Maranon, Maria; Qiu, Feng; Stark, Ruth; White, Steven; Zhang, Xuejun; Foundling, Stephen; Rodriguez, Veronica; Schilling, Curtis; Bunce, Richard; Rivera, Mario
Citation:

Citation: Rodriguez-Maranon, Maria; Qiu, Feng; Stark, Ruth; White, Steven; Zhang, Xuejun; Foundling, Stephen; Rodriguez, Veronica; Schilling, Curtis; Bunce, Richard; Rivera, Mario. "13C NMR Spectroscopic and X-ray Crystallographic Study of the Role Played by Mitochondrial Cytochrome b5 Heme Propionates in the Electrostatic Binding to Cytochrome c"  Biochemistry 35, 16378-16390 (1996).
PubMed: 8973214

Assembly members:

Assembly members:
OMcb5, polymer, 146 residues, Formula weight is not available
Cc, polymer, 105 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Horse   Taxonomy ID: 9796   Superkingdom: Eukaryota   Kingdom: Metaoza   Genus/species: Equus caballus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: MRL2

Data sets:
  • binding_constants
Data typeCount
binding constants1

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1OMcb51
2Cc2

Entities:

Entity 1, OMcb5 146 residues - Formula weight is not available

1   METALAALAVALASPALASERGLYSERASN
2   GLYLYSGLYGLNGLYVALGLUTHRSERVAL
3   THRTYRTYRARGLEUGLUGLUVALALALYS
4   ARGASNSERSERLYSGLUILETRPLEUVAL
5   ILEHISGLYARGVALTYRASPVALTHRARG
6   PHELEUASNGLUHISPROGLYGLYGLUGLU
7   VALLEULEUGLUGLNALAGLYALAASPALA
8   SERGLUSERPHEGLUASPVALGLYHISSER
9   SERASPALAARGGLUMETLEULYSGLNTYR
10   TYRILEGLYASPVALHISPROASNASPLEU
11   LYSPROGLUGLYGLYGLYLYSASPPROSER
12   LYSASNASNTHRCYSLYSSERCYSTRPILE
13   TYRTRPLEULEUPROVALVALGLYALAVAL
14   LEULEUGLYPHELEUCYSARGTYRTYRTHR
15   SERGLUSERTHRSERSER

Entity 2, Cc 105 residues - Formula weight is not available

1   METGLYASPVALGLULYSGLYLYSLYSILE
2   PHEVALGLNLYSCYSALAGLNCYSHISTHR
3   VALGLULYSGLYGLYLYSHISLYSTHRGLY
4   PROASNLEUHISGLYLEUPHEGLYARGLYS
5   THRGLYGLNALAPROGLYPHESERTYRTHR
6   ASPALAASNLYSASNLYSGLYILETHRTRP
7   LYSGLUGLUTHRLEUMETGLUTYRLEUGLU
8   ASNPROLYSLYSTYRILEPROGLYTHRLYS
9   METILEPHEALAGLYILELYSLYSLYSTHR
10   GLUARGGLUASPLEUILEALATYRLEULYS
11   LYSALATHRASNGLU

Samples:

sample_1: OMcb5, [U-13C], 1 – 2 mM; perdeuterated phosphate buffer 5 mM; Cc0 – 2.5 mM; D2O 100%

sample_conditions_1: pH: 7.0; pressure: ambient atm; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
13C NMRsample_1isotropicsample_conditions_1

Software:

software, na - na

NMR spectrometers:

  • Varian XL 400 MHz

Related Database Links:

REF XP_001497331 XP_005608424 XP_008537435 XP_008537436 NP_001039526 NP_001123442 NP_001157486 XP_004007999 XP_004010578
BMRB 1058 1107 1108 1109 1110 1111 1112 1113 1114 1116 1170 1171 1404 16759 17120 17340 1736 1783 17847 17848 1785 1787 1789 216 220 224 2366 2367 2368 243 244 274 285 286 316 317 336 4189 436 437 438 439 4805 4808 4809 4810 499 5026 5372 543 544 545 546 5660 5827 5828 5829 5830 630 645 665 672 673 944 946 947 948
PDB
GB AAB33495 AAI05398 AAX77008 ABA06540 ABA06541
PRF 610169A 711086A
SP P00004 P62894 P62895 P62896 P68096
TPG DAA30512
AlphaFold P62896 P00004 P62894 P62895 P68096