BMRB Entry 5337
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5337
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Kostic, Milka; Pochapsky, Susan; Obenauer, John; Mo, Huaping; Pagani, Gina; Pejchal, Robert; Pochapsky, Thomas. "Comparison of functional domains in vertebrate-type ferredoxins" Biochemistry ., .-..
Assembly members:
human adrenodoxin, polymer, 111 residues, Formula weight is not available
FES, non-polymer, 175.820 Da.
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
human adrenodoxin: EDKITVHFINRDGETLTTKG
KVGDSLLDVVVENNLDIDGF
GACDGTLACSTCHLIFEDHI
YEKLDAITDEENDMLDLAYG
LTDRSRLGCQICLTKSMDNM
TVRVPETVADA
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 578 |
| 13C chemical shifts | 374 |
| 15N chemical shifts | 92 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | human Adx (4-114), chain A | 1 |
| 2 | human Adx (4-114), chain B | 1 |
| 3 | FES A | 2 |
| 4 | FES B | 2 |
Entities:
Entity 1, human Adx (4-114), chain A 111 residues - Formula weight is not available
| 1 | GLU | ASP | LYS | ILE | THR | VAL | HIS | PHE | ILE | ASN | ||||
| 2 | ARG | ASP | GLY | GLU | THR | LEU | THR | THR | LYS | GLY | ||||
| 3 | LYS | VAL | GLY | ASP | SER | LEU | LEU | ASP | VAL | VAL | ||||
| 4 | VAL | GLU | ASN | ASN | LEU | ASP | ILE | ASP | GLY | PHE | ||||
| 5 | GLY | ALA | CYS | ASP | GLY | THR | LEU | ALA | CYS | SER | ||||
| 6 | THR | CYS | HIS | LEU | ILE | PHE | GLU | ASP | HIS | ILE | ||||
| 7 | TYR | GLU | LYS | LEU | ASP | ALA | ILE | THR | ASP | GLU | ||||
| 8 | GLU | ASN | ASP | MET | LEU | ASP | LEU | ALA | TYR | GLY | ||||
| 9 | LEU | THR | ASP | ARG | SER | ARG | LEU | GLY | CYS | GLN | ||||
| 10 | ILE | CYS | LEU | THR | LYS | SER | MET | ASP | ASN | MET | ||||
| 11 | THR | VAL | ARG | VAL | PRO | GLU | THR | VAL | ALA | ASP | ||||
| 12 | ALA |
Entity 2, FES A - Fe2 S2 - 175.820 Da.
| 1 | FES |
Samples:
sample_1: human adrenodoxin, [U-90% 13C; U-90% 15N], 1.5 mM
Experimental_Conditions: pH: 7.4; temperature: 290 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N NOESY | sample_1 | not available | Experimental_Conditions |
| HNCA | sample_1 | not available | Experimental_Conditions |
| HN(CO)CA | sample_1 | not available | Experimental_Conditions |
| HNCO | sample_1 | not available | Experimental_Conditions |
| HNCACB | sample_1 | not available | Experimental_Conditions |
| HCCH-TOCSY | sample_1 | not available | Experimental_Conditions |
| 1H-15N HSQC | sample_1 | not available | Experimental_Conditions |
| 1H-13C HSQC | sample_1 | not available | Experimental_Conditions |
Software:
No software information available
NMR spectrometers:
- Varian INOVA 600 MHz
- Varian INOVA 500 MHz
Related Database Links:
| BMRB | 4073 4074 4439 4440 6026 |
| PDB | |
| DBJ | BAG73145 |
| GB | AAA35829 AAA35855 AAA35856 AAA50462 AAA76853 |
| REF | NP_004100 XP_001105034 XP_003253520 XP_003910717 XP_003923949 |
| SP | P10109 |
| AlphaFold | P10109 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks