BMRB Entry 5262

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PDB ID: 1ck7
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5262
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H and 15N Chemical Shift Assignements for the first fibronectin type II module of MMP-2 (col-1)

Deposition date:

2002-01-20

Original release date:

2002-06-13

Authors:

Gehrmann, Marion; Briknarova, Klara; Banyai, Laszlo; Patthy, Laszlo; Llinas, Miguel

Citation:

Citation: Gehrmann, Marion; Briknarova, Klara; Banyai, Laszlo; Patthy, Laszlo; Llinas, Miguel. "The Col-1 Module of Human Matrix Metalloproteinase-2 (MMP-2): Structural/Functional Relatedness between Gelatin-binding Fibronectin Type II Modules and Lysine-binding Kringle Domains" Biol. Chem. 383, 137-148 (2002).
PubMed: 11928808

Assembly members:

Assembly members:
the first fibronectin type II module of human matrix metalloproteinase, polymer, 60 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
the first fibronectin type II module of human matrix metalloproteinase: RIPVKYGNADGEYCKFPFLF NGKEYNSCTDTGRSDGFLWC STTYNFEKDGKYGFCPHEAL

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
15N chemical shifts	62
1H chemical shifts	397

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	col-1	1

Entities:

Entity 1, col-1 60 residues - Formula weight is not available

1	ARG	ILE	PRO	VAL	LYS	TYR	GLY	ASN	ALA	ASP
2	GLY	GLU	TYR	CYS	LYS	PHE	PRO	PHE	LEU	PHE
3	ASN	GLY	LYS	GLU	TYR	ASN	SER	CYS	THR	ASP
4	THR	GLY	ARG	SER	ASP	GLY	PHE	LEU	TRP	CYS
5	SER	THR	THR	TYR	ASN	PHE	GLU	LYS	ASP	GLY
6	LYS	TYR	GLY	PHE	CYS	PRO	HIS	GLU	ALA	LEU

BMRB Entry 5262

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	ARG	ILE	PRO	VAL	LYS	TYR	GLY	ASN	ALA	ASP
2	GLY	GLU	TYR	CYS	LYS	PHE	PRO	PHE	LEU	PHE
3	ASN	GLY	LYS	GLU	TYR	ASN	SER	CYS	THR	ASP
4	THR	GLY	ARG	SER	ASP	GLY	PHE	LEU	TRP	CYS
5	SER	THR	THR	TYR	ASN	PHE	GLU	LYS	ASP	GLY
6	LYS	TYR	GLY	PHE	CYS	PRO	HIS	GLU	ALA	LEU

Name	Sample	Sample state	Sample conditions
2D COSY	not available	not available	not available
2D TOCSY	not available	not available	not available
2D NOESY	not available	not available	not available
2D 1H-15N HSQC	not available	not available	not available
3D HNHA	not available	not available	not available
3D HNHB	not available	not available	not available
3D 15N-edited TOCSY	not available	not available	not available
3D 15N-edited NOESY	not available	not available	not available

1	ARG	ILE	PRO	VAL	LYS	TYR	GLY	ASN	ALA	ASP
2	GLY	GLU	TYR	CYS	LYS	PHE	PRO	PHE	LEU	PHE
3	ASN	GLY	LYS	GLU	TYR	ASN	SER	CYS	THR	ASP
4	THR	GLY	ARG	SER	ASP	GLY	PHE	LEU	TRP	CYS
5	SER	THR	THR	TYR	ASN	PHE	GLU	LYS	ASP	GLY
6	LYS	TYR	GLY	PHE	CYS	PRO	HIS	GLU	ALA	LEU

1	ARG	ILE	PRO	VAL	LYS	TYR	GLY	ASN	ALA	ASP
2	GLY	GLU	TYR	CYS	LYS	PHE	PRO	PHE	LEU	PHE
3	ASN	GLY	LYS	GLU	TYR	ASN	SER	CYS	THR	ASP
4	THR	GLY	ARG	SER	ASP	GLY	PHE	LEU	TRP	CYS
5	SER	THR	THR	TYR	ASN	PHE	GLU	LYS	ASP	GLY
6	LYS	TYR	GLY	PHE	CYS	PRO	HIS	GLU	ALA	LEU