BMRB Entry 34029

Name: Solution structure of the m-pmv myristoylated matrix protein
Published: 2016-09-30

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PDB ID: 5lmy
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR34029
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the m-pmv myristoylated matrix protein

Deposition date:

2016-08-02

Original release date:

2016-09-30

Authors:

Prchal, J.; Hrabal, R.

Citation:

Citation: Prchal, J.; Srb, P.; Hunter, E.; Ruml, T.; Hrabal, R.. "The structure of myristoylated Mason-Pfizer monkey virus matrix protein and the role of phosphatidylinositol-(4,5)-bisphosphate in its membrane binding." J. Mol. Biol. 423, 427-438 (2012).
PubMed: 22863803

Assembly members:

Assembly members:
entity_1, polymer, 125 residues, 14923.988 Da.

Natural source:

Natural source: Common Name: MPMV Taxonomy ID: 11855 Superkingdom: Viruses Kingdom: not available Genus/species: Betaretrovirus MPMV

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli BL21(DE3)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: XGQELSQHERYVEQLKQALK TRGVKVKYADLLKFFDFVKD TCPWFPQEGTIDIKRWRRVG DCFQDYYNTFGPEKVPVTAF SYWNLIKELIDKKEVNPQVM AAVAQTEEILKSNSQTDLEH HHHHH

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	420
15N chemical shifts	116
1H chemical shifts	533

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1

Entities:

Entity 1, entity_1 125 residues - 14923.988 Da.

1

MYR

GLY

GLN

GLU

LEU

SER

GLN

HIS

GLU

ARG

2

TYR

VAL

GLU

GLN

LEU

LYS

GLN

ALA

LEU

LYS

3

THR

ARG

GLY

VAL

LYS

VAL

LYS

TYR

ALA

ASP

4

LEU

LYS

PHE

ASP

PHE

VAL

LYS

ASP

5

THR

CYS

PRO

TRP

PHE

PRO

GLN

GLU

GLY

THR

6

ILE

ASP

ILE

LYS

ARG

TRP

ARG

VAL

GLY

7

ASP

CYS

PHE

GLN

ASP

TYR

ASN

THR

PHE

8

GLY

PRO

GLU

LYS

VAL

PRO

VAL

THR

ALA

PHE

9

SER

TYR

TRP

ASN

LEU

ILE

LYS

GLU

LEU

ILE

10

ASP

LYS

GLU

VAL

ASN

PRO

GLN

VAL

MET

11

ALA

VAL

ALA

GLN

THR

GLU

ILE

LEU

12

LYS

SER

ASN

SER

GLN

THR

ASP

LEU

GLU

HIS

13

HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC IPAP	sample_2	anisotropic	sample_conditions_2

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BMRB Entry 34029

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: