BMRB Entry 2498

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR2498

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H-NMR Assignment and Secondary structure of Human Insulin-Like Growth Factor-I (IGF-I) in Solution

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Sato, Akihiro; Nishimura, Shigenori; Ohkubo, Tadayasu; Kyogoku, Yoshimasa; Koyama, Satoshi; Kobayashi, Masakazu; Yasuda, Tsutomu; Kobayashi, Yuji

Citation:

Citation: Sato, Akihiro; Nishimura, Shigenori; Ohkubo, Tadayasu; Kyogoku, Yoshimasa; Koyama, Satoshi; Kobayashi, Masakazu; Yasuda, Tsutomu; Kobayashi, Yuji. "1H-NMR Assignment and Secondary structure of Human Insulin-Like Growth Factor-I (IGF-I) in Solution" J. Biochem. 111, 529-536 (1992).

Assembly members:

Assembly members:
insulin-like growth factor-I, polymer, 70 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
insulin-like growth factor-I: GPETLCGAELVDALQFVCGD RGFYFNKPTGYGSSSRRAPQ TGIVDECCFRSCDLRRLEMY CAPLKPAKSA

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
1H chemical shifts	459

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	insulin-like growth factor-I	1

Entities:

Entity 1, insulin-like growth factor-I 70 residues - Formula weight is not available

1	GLY	PRO	GLU	THR	LEU	CYS	GLY	ALA	GLU	LEU
2	VAL	ASP	ALA	LEU	GLN	PHE	VAL	CYS	GLY	ASP
3	ARG	GLY	PHE	TYR	PHE	ASN	LYS	PRO	THR	GLY
4	TYR	GLY	SER	SER	SER	ARG	ARG	ALA	PRO	GLN
5	THR	GLY	ILE	VAL	ASP	GLU	CYS	CYS	PHE	ARG
6	SER	CYS	ASP	LEU	ARG	ARG	LEU	GLU	MET	TYR
7	CYS	ALA	PRO	LEU	LYS	PRO	ALA	LYS	SER	ALA

Samples:

sample_one:

sample_condition_set_one: pH: 3 na; temperature: 313 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

BMRB	15654 4069 4204 4278 4494
PDB	1BQT 1GZR 1GZY 1GZZ 1H02 1H59 1IMX 1PMX 1WQJ 2DSP 2DSQ 2DSR 2GF1 3GF1 3LRI 4XSS
DBJ	BAA01200 BAA01976 BAA07897 BAB77524 BAD92421
EMBL	CAA24998 CAA27153 CAA28759 CAA33746 CAA35098
GB	AAA31043 AAA31544 AAA31545 AAA31546 AAA31547
PIR	S22878
PRF	0912651A 1001199A 1203258A 1707201A 2001274A
REF	NP_000609 NP_001009774 NP_001071296 NP_001075495 NP_001075967
SP	P05019 P07455 P10763 P16545 P17647
TPG	DAA29731
AlphaFold	P07455 P10763 P16545 P05019 P17647

1	GLY	PRO	GLU	THR	LEU	CYS	GLY	ALA	GLU	LEU
2	VAL	ASP	ALA	LEU	GLN	PHE	VAL	CYS	GLY	ASP
3	ARG	GLY	PHE	TYR	PHE	ASN	LYS	PRO	THR	GLY
4	TYR	GLY	SER	SER	SER	ARG	ARG	ALA	PRO	GLN
5	THR	GLY	ILE	VAL	ASP	GLU	CYS	CYS	PHE	ARG
6	SER	CYS	ASP	LEU	ARG	ARG	LEU	GLU	MET	TYR
7	CYS	ALA	PRO	LEU	LYS	PRO	ALA	LYS	SER	ALA

1	GLY	PRO	GLU	THR	LEU	CYS	GLY	ALA	GLU	LEU
2	VAL	ASP	ALA	LEU	GLN	PHE	VAL	CYS	GLY	ASP
3	ARG	GLY	PHE	TYR	PHE	ASN	LYS	PRO	THR	GLY
4	TYR	GLY	SER	SER	SER	ARG	ARG	ALA	PRO	GLN
5	THR	GLY	ILE	VAL	ASP	GLU	CYS	CYS	PHE	ARG
6	SER	CYS	ASP	LEU	ARG	ARG	LEU	GLU	MET	TYR
7	CYS	ALA	PRO	LEU	LYS	PRO	ALA	LYS	SER	ALA