BMRB Entry 18017

Name: The solution structure of RRM
Published: 2012-08-06

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PDB ID: 2lkz
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18017
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The solution structure of RRM

Deposition date:

2011-10-23

Original release date:

2012-08-06

Authors:

Song, Zhenwei; Wu, Peiwen; Zhang, Jiahai; Wu, Jihui; Shi, Yunyu

Citation:

Citation: Song, Zhenwei; Wu, Peiwen; Ji, Peng; Zhang, Jiahai; Gong, Qingguo; Wu, Jihui; Shi, Yunyu. "Solution structure of the second RRM domain of RBM5 and its unusual binding characters for different RNA targets." Biochemistry 51, 6667-6678 (2012).
PubMed: 22839758

Assembly members:

Assembly members:
entity, polymer, 95 residues, 10518.233 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28a modified

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: MGHHHHHHMDTIILRNIAPH TVVDSIMTALSPYASLAVNN IRLIKDKQTQQNRGFAFVQL SSAMDASQLLQILQSLHPPL KIDGKTIGVDFAKSA

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	366
15N chemical shifts	94
1H chemical shifts	642

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	RRM	1

Entities:

Entity 1, RRM 95 residues - 10518.233 Da.

1

MET

GLY

HIS

MET

ASP

2

THR

ILE

LEU

ARG

ASN

ILE

ALA

PRO

HIS

3

THR

VAL

ASP

SER

ILE

MET

THR

ALA

LEU

4

SER

PRO

TYR

ALA

SER

LEU

ALA

VAL

ASN

5

ILE

ARG

LEU

ILE

LYS

ASP

LYS

GLN

THR

GLN

6

GLN

ASN

ARG

GLY

PHE

ALA

PHE

VAL

GLN

LEU

7

SER

ALA

MET

ASP

ALA

SER

GLN

LEU

8

GLN

ILE

LEU

GLN

SER

LEU

HIS

PRO

LEU

9

LYS

ILE

ASP

GLY

LYS

THR

ILE

GLY

VAL

ASP

10

PHE

ALA

LYS

SER

ALA

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D HCCH-COSY	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1

PDB	2LKZ
REF	XP_006511938 XP_006511939 XP_006712982 XP_012373044

BMRB Entry 18017

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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