BMRB Entry 17091

Title:
Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys2His2 zinc finger induces structural rearrangements of typical DNA base determinant positions
Deposition date:
2010-07-31
Original release date:
2011-06-01
Authors:
Malgieri, Gaetano; Zaccaro, Laura; Leone, Marilisa; Bucci, Enrico; Esposito, Sabrina; Baglivo, Ilaria; Del Gatto, Annarita; Scandurra, Roberto; Pedone, Paolo; Fattorusso, Roberto; Isernia, Carla
Citation:

Citation: Malgieri, Gaetano; Zaccaro, Laura; Leone, Marilisa; Bucci, Enrico; Esposito, Sabrina; Baglivo, Ilaria; Del Gatto, Annarita; Russo, Luigi; Scandurra, Roberto; Pedone, Paolo; Fattorusso, Roberto; Isernia, Carla. "Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys-2 His-2 zinc finger induces structural rearrangements of typical DNA base determinant positions."  Biopolymers 95, 801-810 (2011).
PubMed: 21618209

Assembly members:

Assembly members:
SUPERMAN, polymer, 37 residues, 4469.228 Da.
CD, non-polymer, 112.411 Da.

Natural source:

Natural source:   Common Name: Thale cress   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Arabidopsis thaliana

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SUPERMAN: WPPRSYTCSFCKREFRSAQA LGGHMNVHRRDRARLRL

Data sets:
Data typeCount
1H chemical shifts254

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1SUPERMAN1
2CADMIUM ION2

Entities:

Entity 1, SUPERMAN 37 residues - 4469.228 Da.

1   TRPPROPROARGSERTYRTHRCYSSERPHE
2   CYSLYSARGGLUPHEARGSERALAGLNALA
3   LEUGLYGLYHISMETASNVALHISARGARG
4   ASPARGALAARGLEUARGLEU

Entity 2, CADMIUM ION - Cd - 112.411 Da.

1   CD

Related Database Links:

PDB 1NJQ 2L1O
DBJ BAA95724 BAD11142 BAD31832 BAH30467 BAS99682
EMBL CBI23578 CBI23579 CDO99187
GB AAC49116 AAY78753 ACU27362 AEE76721 AEI17369
PRF 2124420A
REF NP_188954 XP_002280764 XP_002280772 XP_002453114 XP_002529318
SP Q38895
AlphaFold Q38895