BMRB Entry 16114
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PDB ID: 2kdi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR16114
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Sgourakis, Nikolaos; Patel, Mayank; Garcia, Angel; Makhatadze, George; McCallum, Scott. "Conformational dynamics and structural plasticity play critical roles in the ubiquitin recognition of a UIM domain." J. Mol. Biol. 396, 1128-1144 (2010).
PubMed: 20053359
Assembly members:
Ubiquitin/UIM_fusion_protein, polymer, 114 residues, Formula weight is not available
Natural source: Common Name: baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGIA
Entity Sequences (FASTA):
Ubiquitin/UIM_fusion_protein: MHHHHHHGEFQIFAKTLTGK
TITLEVESSDTIDNVKSKIQ
DKEGIPPDQQRLIWAGKQLE
DGRTLSDYNIQRESTLHLVL
RLRGGSMGGAADEEELIRKA
IELSLKESRNSGGY
- assigned_chemical_shifts
- RDCs
| Data type | Count |
| 13C chemical shifts | 324 |
| 15N chemical shifts | 105 |
| 1H chemical shifts | 684 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Ubiquitin/UIM fusion protein | 1 |
Entities:
Entity 1, Ubiquitin/UIM fusion protein 114 residues - Formula weight is not available
| 1 | MET | HIS | HIS | HIS | HIS | HIS | HIS | GLY | GLU | PHE | ||||
| 2 | GLN | ILE | PHE | ALA | LYS | THR | LEU | THR | GLY | LYS | ||||
| 3 | THR | ILE | THR | LEU | GLU | VAL | GLU | SER | SER | ASP | ||||
| 4 | THR | ILE | ASP | ASN | VAL | LYS | SER | LYS | ILE | GLN | ||||
| 5 | ASP | LYS | GLU | GLY | ILE | PRO | PRO | ASP | GLN | GLN | ||||
| 6 | ARG | LEU | ILE | TRP | ALA | GLY | LYS | GLN | LEU | GLU | ||||
| 7 | ASP | GLY | ARG | THR | LEU | SER | ASP | TYR | ASN | ILE | ||||
| 8 | GLN | ARG | GLU | SER | THR | LEU | HIS | LEU | VAL | LEU | ||||
| 9 | ARG | LEU | ARG | GLY | GLY | SER | MET | GLY | GLY | ALA | ||||
| 10 | ALA | ASP | GLU | GLU | GLU | LEU | ILE | ARG | LYS | ALA | ||||
| 11 | ILE | GLU | LEU | SER | LEU | LYS | GLU | SER | ARG | ASN | ||||
| 12 | SER | GLY | GLY | TYR |
Related Database Links:
| PDB | 2KDI |
| DBJ | BAO40007 |
| EMBL | CDO91688 |
| GB | KGQ91175 KGR10456 KGT69098 KGU29735 KHC54981 |
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