BMRB Entry 10050

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PDB ID: 1wju
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10050
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1

Deposition date:

2006-11-09

Original release date:

2008-08-13

Authors:

Yoneyama, M.; Koshiba, S.; Tochio, N.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Yoneyama, M.; Koshiba, S.; Tochio, N.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1" .

Assembly members:

Assembly members:
Ubiquitin-like domain, polymer, 100 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P040301-74

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Ubiquitin-like domain: GSSGSSGDNYRTTGIATIEV FLPPRLKKDRKNLLETRLHI TGRELRSKIAETFGLQENYI KIVINKKQLQLGKTLEEQGV AHNVKAMVLELKQSSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	403
15N chemical shifts	86
1H chemical shifts	661

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	NEDD8 ultimate buster-1	1

Entities:

Entity 1, NEDD8 ultimate buster-1 100 residues - Formula weight is not available

1	GLY	SER	SER	GLY	SER	SER	GLY	ASP	ASN	TYR
2	ARG	THR	THR	GLY	ILE	ALA	THR	ILE	GLU	VAL
3	PHE	LEU	PRO	PRO	ARG	LEU	LYS	LYS	ASP	ARG
4	LYS	ASN	LEU	LEU	GLU	THR	ARG	LEU	HIS	ILE
5	THR	GLY	ARG	GLU	LEU	ARG	SER	LYS	ILE	ALA
6	GLU	THR	PHE	GLY	LEU	GLN	GLU	ASN	TYR	ILE
7	LYS	ILE	VAL	ILE	ASN	LYS	LYS	GLN	LEU	GLN
8	LEU	GLY	LYS	THR	LEU	GLU	GLU	GLN	GLY	VAL
9	ALA	HIS	ASN	VAL	LYS	ALA	MET	VAL	LEU	GLU
10	LEU	LYS	GLN	SER	SER	GLY	PRO	SER	SER	GLY

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	not available	condition_1
3D 13C-separated NOESY	sample_1	not available	condition_1

BMRB Entry 10050

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	SER	GLY	SER	SER	GLY	ASP	ASN	TYR
2	ARG	THR	THR	GLY	ILE	ALA	THR	ILE	GLU	VAL
3	PHE	LEU	PRO	PRO	ARG	LEU	LYS	LYS	ASP	ARG
4	LYS	ASN	LEU	LEU	GLU	THR	ARG	LEU	HIS	ILE
5	THR	GLY	ARG	GLU	LEU	ARG	SER	LYS	ILE	ALA
6	GLU	THR	PHE	GLY	LEU	GLN	GLU	ASN	TYR	ILE
7	LYS	ILE	VAL	ILE	ASN	LYS	LYS	GLN	LEU	GLN
8	LEU	GLY	LYS	THR	LEU	GLU	GLU	GLN	GLY	VAL
9	ALA	HIS	ASN	VAL	LYS	ALA	MET	VAL	LEU	GLU
10	LEU	LYS	GLN	SER	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	ASP	ASN	TYR
2	ARG	THR	THR	GLY	ILE	ALA	THR	ILE	GLU	VAL
3	PHE	LEU	PRO	PRO	ARG	LEU	LYS	LYS	ASP	ARG
4	LYS	ASN	LEU	LEU	GLU	THR	ARG	LEU	HIS	ILE
5	THR	GLY	ARG	GLU	LEU	ARG	SER	LYS	ILE	ALA
6	GLU	THR	PHE	GLY	LEU	GLN	GLU	ASN	TYR	ILE
7	LYS	ILE	VAL	ILE	ASN	LYS	LYS	GLN	LEU	GLN
8	LEU	GLY	LYS	THR	LEU	GLU	GLU	GLN	GLY	VAL
9	ALA	HIS	ASN	VAL	LYS	ALA	MET	VAL	LEU	GLU
10	LEU	LYS	GLN	SER	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	ASP	ASN	TYR
2	ARG	THR	THR	GLY	ILE	ALA	THR	ILE	GLU	VAL
3	PHE	LEU	PRO	PRO	ARG	LEU	LYS	LYS	ASP	ARG
4	LYS	ASN	LEU	LEU	GLU	THR	ARG	LEU	HIS	ILE
5	THR	GLY	ARG	GLU	LEU	ARG	SER	LYS	ILE	ALA
6	GLU	THR	PHE	GLY	LEU	GLN	GLU	ASN	TYR	ILE
7	LYS	ILE	VAL	ILE	ASN	LYS	LYS	GLN	LEU	GLN
8	LEU	GLY	LYS	THR	LEU	GLU	GLU	GLN	GLY	VAL
9	ALA	HIS	ASN	VAL	LYS	ALA	MET	VAL	LEU	GLU
10	LEU	LYS	GLN	SER	SER	GLY	PRO	SER	SER	GLY