NMR Restraints Grid
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NMR Restraints Grid |
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Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
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567215 |
2lzl   |
18763 | cing | 4-filtered-FRED | Wattos | check | violation | distance |
data_2lzl
save_distance_constraint_statistics_1
_Distance_constraint_stats_list.Sf_category distance_constraint_statistics
_Distance_constraint_stats_list.Constraint_list_ID 1
_Distance_constraint_stats_list.Constraint_count 8
_Distance_constraint_stats_list.Viol_count 149
_Distance_constraint_stats_list.Viol_total 1397.459
_Distance_constraint_stats_list.Viol_max 1.285
_Distance_constraint_stats_list.Viol_rms 0.4117
_Distance_constraint_stats_list.Viol_average_all_restraints 0.2795
_Distance_constraint_stats_list.Viol_average_violations_only 0.3752
_Distance_constraint_stats_list.Cutoff_violation_report 0.500
_Distance_constraint_stats_list.Details
;
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * ID of the restraint list.
* 5 * Number of restraints in list.
* 6 * Number of violated restraints (each model violation is used).
* 7 * Sum of violations in Angstrom.
* 8 * Maximum violation of a restraint without averaging in any way.
* 9 * Rms of violations over all restraints.
* 10 * Average violation over all restraints.
* 11 * Average violation over violated restraints.
This violation is averaged over only those models in which the restraint is violated.
These definitions are from: Doreleijers, et al., J. Mol. Biol. 281, 149-164 (1998).
* 12 * Threshold for reporting violations (in Angstrom) in the last columns of the next table.
* 13 * This tag
Description of the tags in the per residue table below:
* 1 * Chain identifier (can be absent if none defined)
* 2 * Residue number
* 3 * Residue name
* 4 * Maximum violation in ensemble of models (without any averaging)
* 5 * Model number with the maximum violation
* 6 * Number of models with a violation above cutoff
* 7 * List of models (1 character per model) with a violation above cutoff.
An '*' marks a violation above the cutoff. A '+' indicates the largest
violation above the cutoff and a '-' marks the smallest violation over cutoff.
For models 5, 15, 25,... a ' ' is replaced by a '.'.
For models 10, 20, 30,... a ' ' is replaced by a digit starting at 1.
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the per restraint table below:
* 1 * Restraint ID within restraint list.
First node, FIRST member, first atom's:
* 2 * Chain identifier (can be absent if none defined)
* 3 * Residue number
* 4 * Residue name
* 5 * Name of (pseudo-)atom
First node, SECOND member, first atom's:
* 6 * Chain identifier (can be absent if none defined)
* 7 * Residue number
* 8 * Residue name
* 9 * Name of (pseudo-)atom
FIRST node's:
* 10 * Target distance value (Angstrom)
* 11 * Lower bound distance (Angstrom)
* 12 * Upper bound distance (Angstrom)
* 13 * Average distance in ensemble of models
* 14 * Minimum distance in ensemble of models
* 15 * Maximum distance in ensemble of models
* 16 * Maximum violation (without any averaging)
* 17 * Model number with the maximum violation
* 18 * Number of models with a violation above cutoff
* 19 * List of models with a violation above cutoff. See description above.
* 20 * Administrative tag
* 21 * Administrative tag
;
loop_
_Distance_constraint_stats_per_res.Atom_entity_assembly_ID
_Distance_constraint_stats_per_res.Atom_comp_index_ID
_Distance_constraint_stats_per_res.Atom_comp_ID
_Distance_constraint_stats_per_res.Total_violation
_Distance_constraint_stats_per_res.Max_violation
_Distance_constraint_stats_per_res.Max_violation_model_number
_Distance_constraint_stats_per_res.Over_cutoff_viol_count
_Distance_constraint_stats_per_res.Over_cutoff_viol_per_model
1 21 LEU 0.000 0.000 . 0 "[ . 1 . 2 .]"
1 25 VAL 4.383 0.103 6 0 "[ . 1 . 2 .]"
1 31 ILE 31.907 1.285 5 25 [****+*******************-]
1 32 LEU 11.433 0.483 25 0 "[ . 1 . 2 .]"
1 35 ALA 3.758 0.159 1 0 "[ . 1 . 2 .]"
1 42 LEU 4.416 0.729 11 5 "[ . * *1+- . 2 *.]"
2 17 TYR 0.000 0.000 . 0 "[ . 1 . 2 .]"
2 21 LEU 1.945 0.103 6 0 "[ . 1 . 2 .]"
2 23 TYR 2.438 0.103 1 0 "[ . 1 . 2 .]"
2 27 PHE 43.340 1.285 5 25 [****+*******************-]
2 34 VAL 3.758 0.159 1 0 "[ . 1 . 2 .]"
2 38 THR 4.416 0.729 11 5 "[ . * *1+- . 2 *.]"
stop_
loop_
_Distance_constraint_stats.Restraint_ID
_Distance_constraint_stats.Atom_1_entity_assembly_ID
_Distance_constraint_stats.Atom_1_comp_index_ID
_Distance_constraint_stats.Atom_1_comp_ID
_Distance_constraint_stats.Atom_1_ID
_Distance_constraint_stats.Atom_2_entity_assembly_ID
_Distance_constraint_stats.Atom_2_comp_index_ID
_Distance_constraint_stats.Atom_2_comp_ID
_Distance_constraint_stats.Atom_2_ID
_Distance_constraint_stats.Node_1_distance_val
_Distance_constraint_stats.Node_1_distance_lower_bound_val
_Distance_constraint_stats.Node_1_distance_upper_bound_val
_Distance_constraint_stats.Distance_average
_Distance_constraint_stats.Distance_minimum
_Distance_constraint_stats.Distance_maximum
_Distance_constraint_stats.Max_violation
_Distance_constraint_stats.Max_violation_model_number
_Distance_constraint_stats.Over_cutoff_violation_count
_Distance_constraint_stats.Over_cutoff_viol_per_model
_Distance_constraint_stats.Distance_constraint_stats_ID
1 1 21 LEU MD1 2 17 TYR QD . . 4.000 3.252 2.992 3.566 . 0 0 "[ . 1 . 2 .]" 1
2 1 25 VAL MG1 2 23 TYR QD . . 4.200 4.291 4.279 4.303 0.103 1 0 "[ . 1 . 2 .]" 1
3 1 25 VAL MG2 2 21 LEU MD2 . . 4.000 4.078 4.045 4.103 0.103 6 0 "[ . 1 . 2 .]" 1
4 1 25 VAL MG2 2 23 TYR QD . . 4.200 4.191 4.127 4.217 0.017 6 0 "[ . 1 . 2 .]" 1
5 1 31 ILE MD 2 27 PHE QD . . 4.300 5.576 5.565 5.585 1.285 5 25 [****+*******************-] 1
6 1 32 LEU QD 2 27 PHE QD . . 4.000 4.457 4.424 4.483 0.483 25 0 "[ . 1 . 2 .]" 1
7 1 35 ALA MB 2 34 VAL MG1 . . 4.300 4.450 4.440 4.459 0.159 1 0 "[ . 1 . 2 .]" 1
8 1 42 LEU MD1 2 38 THR MG . . 4.000 3.470 2.149 4.729 0.729 11 5 "[ . * *1+- . 2 *.]" 1
stop_
save_
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