NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
557074 2m33 18919 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2m33


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        73
    _Stereo_assign_list.Swap_count           1
    _Stereo_assign_list.Swap_percentage      1.4
    _Stereo_assign_list.Deassign_count       33
    _Stereo_assign_list.Deassign_percentage  45.2
    _Stereo_assign_list.Model_count          23
    _Stereo_assign_list.Total_e_low_states   119.235
    _Stereo_assign_list.Total_e_high_states  294.603
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   4 GLN QE 60 no  100.0 100.0  0.156  0.156  0.000  3  0 no  0.001   0   0 
       1   7 LYS QB 45 no  100.0  97.1  1.128  1.161  0.033  5  0 no  0.564   0   1 
       1   8 ASP QB 58 no    0.0   0.0  0.000  0.139  0.139  4  0 no  0.773   0   2 
       1   9 VAL QG  5 no  100.0  93.6 14.908 15.929  1.020 22  3 yes 1.248   3  31 
       1  10 LYS QG 22 no   73.9   6.0  0.553  9.176  8.623 11  0 yes 3.339  49  73 
       1  11 TYR QB 27 no  100.0  93.3  3.259  3.493  0.234  9  2 yes 1.594   1   2 
       1  12 TYR QB 44 no    0.0   0.0  0.000  2.736  2.736  6  0 yes 2.195  25  41 
       1  14 LEU QB 73 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  14 LEU QD 32 no   78.3   0.0  0.000  5.230  5.230  8  0 yes 2.184  42  43 
       1  16 GLU QB 15 no   87.0  75.7  1.274  1.681  0.408 13  0 yes 1.106   3  11 
       1  17 ILE QG 24 no   78.3  90.7  2.008  2.214  0.206 10  0 yes 1.026   1   7 
       1  20 HIS QB 31 no   95.7   0.0  0.000  1.961  1.961  8  0 yes 2.292  14  32 
       1  21 ASN QB 20 no  100.0  56.5  1.231  2.179  0.949 12  2 yes 2.385   6  15 
       1  21 ASN QD 37 no   56.5   2.9  0.061  2.132  2.071  7  2 yes 2.009  18  22 
       1  22 HIS QB 43 no   91.3  85.7  1.245  1.454  0.208  6  0 no  0.826   0   6 
       1  24 LYS QB 57 no  100.0   0.0  0.000  0.006  0.006  4  0 no  0.143   0   0 
       1  25 SER QB 72 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  27 TRP QB 56 no  100.0  94.5  4.045  4.281  0.236  4  0 yes 1.078   1   8 
       1  28 LEU QB 55 no  100.0   0.0  0.000  0.061  0.061  4  0 no  0.431   0   0 
       1  28 LEU QD  7 no  100.0   0.0  0.000  2.610  2.610 20  0 yes 2.228  17  33 
       1  29 ILE QG 71 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  30 LEU QB 19 no  100.0  73.1  1.954  2.675  0.720 12  2 yes 1.766   6  16 
       1  30 LEU QD 10 no   91.3   0.0  0.000  0.742  0.742 16  2 yes 1.364   3  21 
       1  34 VAL QG  1 no  100.0  94.5 39.085 41.379  2.293 38  1 yes 1.202   8  72 
       1  35 TYR QB 34 no  100.0  94.9  6.172  6.507  0.334  7  0 no  0.882   0   9 
       1  36 ASP QB 14 no  100.0  97.9  2.164  2.211  0.046 13  0 no  0.519   0   1 
       1  37 LEU QB 70 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  39 LYS QB 54 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000   0   0 
       1  40 PHE QB 30 no  100.0  47.4  1.351  2.852  1.502  8  0 yes 1.283  11  47 
       1  40 PHE QD 29 no   95.7  65.3  9.302 14.242  4.940  8  0 yes 2.347  45  69 
       1  41 LEU QB 11 no  100.0  87.3  3.247  3.718  0.471 16  8 yes 1.264   1  10 
       1  41 LEU QD  4 no  100.0  92.6 12.168 13.134  0.965 24  6 yes 1.184   1  28 
       1  42 GLU QB 36 no  100.0  82.1  1.878  2.287  0.409  7  2 no  0.650   0   2 
       1  43 GLU QB 42 no   91.3   0.0  0.000  0.079  0.079  6  0 no  0.600   0   1 
       1  47 GLY QA 53 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.000   0   0 
       1  48 GLU QB  6 no  100.0  55.0  5.219  9.492  4.273 22  8 yes 2.017  36  78 
       1  49 GLU QB 41 no  100.0   0.0  0.000  0.019  0.019  6  0 no  0.420   0   0 
       1  50 VAL QG 69 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  53 GLU QB 23 no  100.0  91.1  9.205 10.100  0.895 11  2 yes 1.244   5  22 
       1  53 GLU QG 17 no  100.0  80.5  3.783  4.700  0.917 13  5 no  0.671   0   2 
       1  54 GLN QB 21 no  100.0  79.0  3.578  4.528  0.950 12  4 yes 1.116   1   6 
       1  54 GLN QE  2 no   95.7  23.4  7.612 32.495 24.883 25 16 yes 5.046  81 168 
       1  54 GLN QG 12 no  100.0  84.1 11.248 13.374  2.126 15  3 yes 1.473   7  76 
       1  56 GLY QA 68 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  57 GLY QA 67 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  58 ASP QB 52 no  100.0   0.0  0.000  0.014  0.014  4  0 no  0.267   0   0 
       1  61 GLU QB 35 no  100.0  36.7  2.225  6.062  3.837  7  2 yes 2.518  17  27 
       1  61 GLU QG 40 no  100.0   0.0  0.000  0.001  0.001  6  0 no  0.174   0   0 
       1  62 ASN QB  8 no  100.0  60.7  3.958  6.524  2.566 17  4 yes 1.879   7  50 
       1  62 ASN QD  9 yes  78.3  19.1  7.985 41.737 33.752 17  8 yes 3.896 139 171 
       1  63 PHE QB 66 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  64 GLU QB 51 no  100.0   0.0  0.000  0.017  0.017  4  0 no  0.428   0   0 
       1  64 GLU QG 50 no  100.0   0.0  0.000  0.001  0.001  4  0 no  0.181   0   0 
       1  65 ASP QB 33 no  100.0  64.1  0.488  0.762  0.273  7  0 yes 0.576   0  18 
       1  69 SER QB 49 no  100.0   0.0  0.000  0.002  0.002  4  0 no  0.152   0   0 
       1  71 ASP QB 48 no  100.0   0.0  0.000  0.002  0.002  4  0 no  0.205   0   0 
       1  73 ARG QB 47 no  100.0   0.0  0.000  0.000  0.000  4  0 no  0.063   0   0 
       1  74 GLU QB 26 no   52.2  40.8  0.362  0.886  0.525  9  0 yes 1.973   6  14 
       1  74 GLU QG 28 no   91.3   0.0  0.000  1.302  1.302  8  0 yes 1.716   7  32 
       1  75 LEU QB 39 no  100.0   0.0  0.000  0.000  0.000  6  0 no  0.033   0   0 
       1  77 LYS QB 25 no  100.0  94.2  3.979  4.225  0.246  9  0 no  0.816   0   7 
       1  82 GLY QA  3 no  100.0  93.1  5.582  5.996  0.414 24  3 yes 1.551   2   9 
       1  83 GLU QB 16 no   95.7  41.5  1.393  3.357  1.964 13  1 yes 2.183  11  26 
       1  85 HIS QB 18 no   78.3  85.3  1.124  1.317  0.193 12  2 no  0.932   0   8 
       1  86 PRO QD 13 no    8.7   0.0  0.000  0.763  0.763 14  4 yes 1.578   5  17 
       1  88 ASP QB 38 no  100.0   0.0  0.000  0.028  0.028  6  0 no  0.713   0   1 
       1  89 ARG QB 65 no  100.0   0.0  0.000  0.007  0.007  2  0 no  0.254   0   0 
       1  92 LEU QB 59 no  100.0 100.0  0.439  0.439  0.000  3  0 no  0.027   0   0 
       1  92 LEU QD 46 no  100.0   0.0  0.000  0.002  0.002  4  0 no  0.169   0   0 
       1  95 PRO QD 64 no  100.0   0.0  0.000  0.027  0.027  2  0 no  0.296   0   0 
       1  96 MET QB 63 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1  97 GLU QB 62 no  100.0   0.0  0.000  0.000  0.000  2  0 no  0.000   0   0 
       1 104 ASP QB 61 no  100.0   0.0  0.000  0.001  0.001  2  0 no  0.131   0   0 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Saturday, May 18, 2024 4:37:00 PM GMT (wattos1)