NMR Restraints Grid |
Result table
image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
542114 | 2lgf | 17807 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2lgf save_NOE_Completeness _NOE_completeness_stats.Sf_category NOE_completeness_statistics _NOE_completeness_stats.Model_count 1 _NOE_completeness_stats.Residue_count 165 _NOE_completeness_stats.Total_atom_count 2530 _NOE_completeness_stats.Observable_atom_definition ob_standard _NOE_completeness_stats.Observable_atom_count 876 _NOE_completeness_stats.Use_intra_residue_restraints no _NOE_completeness_stats.Redundancy_threshold_pct 5.0 _NOE_completeness_stats.Distance_averaging_power 1.00 _NOE_completeness_stats.Completeness_cutoff 4.00 _NOE_completeness_stats.Completeness_cumulative_pct 3.6 _NOE_completeness_stats.Constraint_unexpanded_count 390 _NOE_completeness_stats.Constraint_count 390 _NOE_completeness_stats.Constraint_exp_unfiltered_count 2552 _NOE_completeness_stats.Constraint_exceptional_count 0 _NOE_completeness_stats.Constraint_nonobservable_count 148 _NOE_completeness_stats.Constraint_intraresidue_count 60 _NOE_completeness_stats.Constraint_surplus_count 3 _NOE_completeness_stats.Constraint_observed_count 179 _NOE_completeness_stats.Constraint_expected_count 2550 _NOE_completeness_stats.Constraint_matched_count 91 _NOE_completeness_stats.Constraint_unmatched_count 88 _NOE_completeness_stats.Constraint_exp_nonobs_count 2459 _NOE_completeness_stats.Details ; A detailed methodology description is available at: http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html Please note that the contributions in ambiguous restraints are considered separate 'restraints' for the sets defined below. The cut off for all statistics except those in the by-shell table is given below by the above tag: _NOE_completeness_stats.Completeness_cutoff Description of the tags in this list: * 1 * Administrative tag * 2 * Administrative tag * 3 * Administrative tag * 4 * Number of models * 5 * Number of residues * 6 * Number of atoms * 7 * Standard set name of observable atom definitions see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999). * 8 * Observable atom(group)s * 9 * Include intra residue restraints * 10 * Surplus threshold for determining redundant restraints * 11 * Power for averaging the distance over models * 12 * Up to what distance are NOEs expected * 13 * Cumulative completeness percentage * 14 * Number of unexpanded restraints in restraint list. * 15 * Number of restraints in restraint list. Set U * 16 * Expected restraints based on criteria in list. Set V Set V differs from set B only if intra residue restraints are analyzed. * 17 * Exceptional restraints, i.e. with an unknown atom.Set E * 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O Even though restraints with these atom types might have been observed they are excluded from the analysis. * 19 * Intra-residue restraints if not to be analyzed. Set I * 20 * Surplus like double restraints. Set S * 21 * Observed restraints. Set A = U - (E u O u I u S) * 22 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 23 * Observed restraints matched to the expected. Set M = A n B * 24 * Observed restraints that were not expected. Set C = A - M * 25 * Expected restraints that were not observed. Set D = B - M * 26 * This tag Description of the tags in the class table: * 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts. Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular. * 2 * Observed restraints. Set A = U - (E u O u I u S) * 3 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 4 * Observed restraints matched to the expected. Set M = A n B * 5 * Completeness percentage * 6 * Standard deviation from the average over the classes. * 7 * Extra information * 8 * Administrative tag * 9 * Administrative tag Description of the tags in the shell table. The first row shows the lower limit of the shells requested and The last row shows the total number of restraints over the shells. * 1 * Description of the content of the row: edges, shell, or sums. The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others. * 2 * Lower limit of shell of expected restraints. * 3 * Upper limit of shell of expected restraints. * 4 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 5 * Observed restraints matched to the expected. Set M = A n B * 6 * Matched restraints with experimental distance in shell 1 * 7 * Matched restraints with experimental distance in shell 2 * 8 * Matched restraints with experimental distance in shell 3 * 9 * Matched restraints with experimental distance in shell 4 * 10 * Matched restraints with experimental distance in shell 5 * 11 * Matched restraints with experimental distance in shell 6 * 12 * Matched restraints with experimental distance in shell 7 * 13 * Matched restraints with experimental distance in shell 8 * 14 * Matched restraints with experimental distance in shell 9 * 15 * Matched restraints overflowing the last shell * 16 * Completeness percentage for this shell * 17 * Completeness percentage up to upper limit of this shell * 18 * Administrative tag * 19 * Administrative tag Description of the tags in the residue table: * 1 * Chain identifier * 2 * Residue number * 3 * Residue name * 4 * Observable atom(group)s for this residue. * 5 * Observed restraints. Set A = U - (E u O u I u S) * 6 * Expected restraints based on criteria as in A. Set B = V - (I u S) * 7 * Observed restraints matched to the expected. Set M = A n B * 8 * Completeness percentage * 9 * Standard deviation from the average over the residues. * 10 * Extra information * 11 * Administrative tag * 12 * Administrative tag ; loop_ _NOE_completeness_class.Type _NOE_completeness_class.Constraint_observed_count _NOE_completeness_class.Constraint_expected_count _NOE_completeness_class.Constraint_matched_count _NOE_completeness_class.Completeness_cumulative_pct _NOE_completeness_class.Std_dev _NOE_completeness_class.Details intraresidue 0 0 0 . . "no intras" sequential 65 806 43 5.3 0.3 . medium-range 41 791 21 2.7 -0.4 . long-range 4 631 0 0.0 -1.0 >sigma intermolecular 69 322 27 8.4 1.1 >sigma stop_ loop_ _NOE_completeness_shell.Type _NOE_completeness_shell.Shell_start _NOE_completeness_shell.Shell_end _NOE_completeness_shell.Constraint_expected_count _NOE_completeness_shell.Constraint_matched_count _NOE_completeness_shell.Matched_shell_1 _NOE_completeness_shell.Matched_shell_2 _NOE_completeness_shell.Matched_shell_3 _NOE_completeness_shell.Matched_shell_4 _NOE_completeness_shell.Matched_shell_5 _NOE_completeness_shell.Matched_shell_6 _NOE_completeness_shell.Matched_shell_7 _NOE_completeness_shell.Matched_shell_8 _NOE_completeness_shell.Matched_shell_9 _NOE_completeness_shell.Matched_shell_overflow _NOE_completeness_shell.Completeness_shell_pct _NOE_completeness_shell.Completeness_cumulative_pct edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . . shell 0.00 2.00 26 4 0 0 0 0 1 0 0 0 . 3 15.4 15.4 shell 2.00 2.50 284 14 0 0 1 4 1 0 1 0 . 7 4.9 5.8 shell 2.50 3.00 490 28 0 0 5 7 3 3 1 3 . 6 5.7 5.8 shell 3.00 3.50 626 15 0 1 1 1 1 3 4 1 . 3 2.4 4.3 shell 3.50 4.00 1124 30 0 0 1 7 3 2 6 3 . 8 2.7 3.6 shell 4.00 4.50 1626 29 0 0 0 0 6 2 9 4 . 8 1.8 2.9 shell 4.50 5.00 2179 20 0 0 0 0 0 3 4 5 . 8 0.9 2.2 shell 5.00 5.50 2623 11 0 0 0 0 0 0 4 2 . 5 0.4 1.7 shell 5.50 6.00 3114 10 0 0 0 0 0 0 0 3 . 7 0.3 1.3 shell 6.00 6.50 3327 14 0 0 0 0 0 0 0 0 . 14 0.4 1.1 shell 6.50 7.00 3725 4 0 0 0 0 0 0 0 0 . 4 0.1 0.9 shell 7.00 7.50 4016 0 0 0 0 0 0 0 0 0 . 0 0.0 0.8 shell 7.50 8.00 4513 0 0 0 0 0 0 0 0 0 . 0 0.0 0.6 shell 8.00 8.50 4896 0 0 0 0 0 0 0 0 0 . 0 0.0 0.5 shell 8.50 9.00 5164 0 0 0 0 0 0 0 0 0 . 0 0.0 0.5 sums . . 37733 179 0 1 8 19 15 13 29 21 . 73 . . stop_ loop_ _NOE_completeness_comp.Entity_assembly_ID _NOE_completeness_comp.Comp_index_ID _NOE_completeness_comp.Comp_ID _NOE_completeness_comp.Obs_atom_count _NOE_completeness_comp.Constraint_observed_count _NOE_completeness_comp.Constraint_expected_count _NOE_completeness_comp.Constraint_matched_count _NOE_completeness_comp.Completeness_cumulative_pct _NOE_completeness_comp.Std_dev _NOE_completeness_comp.Details 1 1 GLN 7 0 2 0 0.0 -0.3 . 1 2 LEU 7 0 28 0 0.0 -0.3 . 1 3 THR 4 0 15 0 0.0 -0.3 . 1 4 GLU 5 0 13 0 0.0 -0.3 . 1 5 GLU 5 0 26 0 0.0 -0.3 . 1 6 GLN 7 0 48 0 0.0 -0.3 . 1 7 ILE 6 0 35 0 0.0 -0.3 . 1 8 ALA 3 0 17 0 0.0 -0.3 . 1 9 GLU 5 0 33 0 0.0 -0.3 . 1 10 PHE 7 0 64 0 0.0 -0.3 . 1 11 LYS 7 0 21 0 0.0 -0.3 . 1 12 GLU 5 0 25 0 0.0 -0.3 . 1 13 ALA 3 0 37 0 0.0 -0.3 . 1 14 PHE 7 0 56 0 0.0 -0.3 . 1 15 SER 4 0 17 0 0.0 -0.3 . 1 16 LEU 7 0 33 0 0.0 -0.3 . 1 17 PHE 7 0 46 0 0.0 -0.3 . 1 18 ASP 4 0 24 0 0.0 -0.3 . 1 19 LYS 7 0 18 0 0.0 -0.3 . 1 20 ASP 4 0 10 0 0.0 -0.3 . 1 21 GLY 3 0 15 0 0.0 -0.3 . 1 22 ASP 4 0 9 0 0.0 -0.3 . 1 23 GLY 3 0 13 0 0.0 -0.3 . 1 24 THR 4 0 18 0 0.0 -0.3 . 1 25 ILE 6 0 53 0 0.0 -0.3 . 1 26 THR 4 0 18 0 0.0 -0.3 . 1 27 THR 4 0 20 0 0.0 -0.3 . 1 28 LYS 7 0 21 0 0.0 -0.3 . 1 29 GLU 5 0 32 0 0.0 -0.3 . 1 30 LEU 7 0 54 0 0.0 -0.3 . 1 31 GLY 3 0 26 0 0.0 -0.3 . 1 32 THR 4 0 26 0 0.0 -0.3 . 1 33 VAL 5 0 40 0 0.0 -0.3 . 1 34 MET 6 6 49 5 10.2 1.0 . 1 35 ARG 7 0 42 0 0.0 -0.3 . 1 36 SER 4 0 15 0 0.0 -0.3 . 1 37 LEU 7 0 55 0 0.0 -0.3 . 1 38 GLY 3 0 13 0 0.0 -0.3 . 1 39 GLN 7 0 27 0 0.0 -0.3 . 1 40 ASN 6 0 10 0 0.0 -0.3 . 1 41 PRO 5 0 34 0 0.0 -0.3 . 1 42 THR 4 0 12 0 0.0 -0.3 . 1 43 GLU 5 0 20 0 0.0 -0.3 . 1 44 ALA 3 0 16 0 0.0 -0.3 . 1 45 GLU 5 0 25 0 0.0 -0.3 . 1 46 LEU 7 0 51 0 0.0 -0.3 . 1 47 GLN 7 0 28 0 0.0 -0.3 . 1 48 ASP 4 0 16 0 0.0 -0.3 . 1 49 MET 6 5 34 1 2.9 0.0 . 1 50 ILE 6 0 49 0 0.0 -0.3 . 1 51 ASN 6 0 22 0 0.0 -0.3 . 1 52 GLU 5 0 21 0 0.0 -0.3 . 1 53 VAL 5 0 45 0 0.0 -0.3 . 1 54 ASP 4 0 27 0 0.0 -0.3 . 1 55 ALA 3 0 9 0 0.0 -0.3 . 1 56 ASP 4 0 9 0 0.0 -0.3 . 1 57 GLY 3 0 14 0 0.0 -0.3 . 1 58 ASN 6 0 12 0 0.0 -0.3 . 1 59 GLY 3 0 9 0 0.0 -0.3 . 1 60 THR 4 0 22 0 0.0 -0.3 . 1 61 ILE 6 0 53 0 0.0 -0.3 . 1 62 ASP 4 0 25 0 0.0 -0.3 . 1 63 PHE 7 0 45 0 0.0 -0.3 . 1 64 PRO 5 0 26 0 0.0 -0.3 . 1 65 GLU 5 0 33 0 0.0 -0.3 . 1 66 PHE 7 0 59 0 0.0 -0.3 . 1 67 LEU 7 0 48 0 0.0 -0.3 . 1 68 THR 4 0 19 0 0.0 -0.3 . 1 69 MET 6 12 63 4 6.3 0.5 . 1 70 MET 6 9 59 3 5.1 0.3 . 1 71 ALA 3 0 18 0 0.0 -0.3 . 1 72 ARG 7 0 40 0 0.0 -0.3 . 1 73 LYS 7 0 62 0 0.0 -0.3 . 1 74 MET 6 8 27 3 11.1 1.1 >sigma 1 75 LYS 7 0 17 0 0.0 -0.3 . 1 76 ASP 4 0 22 0 0.0 -0.3 . 1 77 THR 4 0 23 0 0.0 -0.3 . 1 78 ASP 4 0 14 0 0.0 -0.3 . 1 79 SER 4 0 16 0 0.0 -0.3 . 1 80 GLU 5 0 19 0 0.0 -0.3 . 1 81 GLU 5 0 19 0 0.0 -0.3 . 1 82 GLU 5 0 28 0 0.0 -0.3 . 1 83 ILE 6 0 52 0 0.0 -0.3 . 1 84 ARG 7 0 40 0 0.0 -0.3 . 1 85 GLU 5 0 28 0 0.0 -0.3 . 1 86 ALA 3 0 28 0 0.0 -0.3 . 1 87 PHE 7 0 55 0 0.0 -0.3 . 1 88 ARG 7 0 37 0 0.0 -0.3 . 1 89 VAL 5 0 39 0 0.0 -0.3 . 1 90 PHE 7 0 62 0 0.0 -0.3 . 1 91 ASP 4 0 17 0 0.0 -0.3 . 1 92 LYS 7 0 37 0 0.0 -0.3 . 1 93 ASP 4 0 10 0 0.0 -0.3 . 1 94 GLY 3 0 11 0 0.0 -0.3 . 1 95 ASN 6 0 15 0 0.0 -0.3 . 1 96 GLY 3 0 11 0 0.0 -0.3 . 1 97 TYR 6 0 27 0 0.0 -0.3 . 1 98 ILE 6 0 50 0 0.0 -0.3 . 1 99 SER 4 0 22 0 0.0 -0.3 . 1 100 ALA 3 0 26 0 0.0 -0.3 . 1 101 ALA 3 0 17 0 0.0 -0.3 . 1 102 GLU 5 0 35 0 0.0 -0.3 . 1 103 LEU 7 0 77 0 0.0 -0.3 . 1 104 ARG 7 0 54 0 0.0 -0.3 . 1 105 HIS 6 0 27 0 0.0 -0.3 . 1 106 VAL 5 0 56 0 0.0 -0.3 . 1 107 MET 6 14 65 5 7.7 0.6 . 1 108 THR 4 0 28 0 0.0 -0.3 . 1 109 ASN 6 0 28 0 0.0 -0.3 . 1 110 LEU 7 0 61 0 0.0 -0.3 . 1 111 GLY 3 0 10 0 0.0 -0.3 . 1 112 GLU 5 0 42 0 0.0 -0.3 . 1 113 LYS 7 0 19 0 0.0 -0.3 . 1 114 LEU 7 0 58 0 0.0 -0.3 . 1 115 THR 4 0 22 0 0.0 -0.3 . 1 116 ASP 4 0 18 0 0.0 -0.3 . 1 117 GLU 5 0 16 0 0.0 -0.3 . 1 118 GLU 5 0 41 0 0.0 -0.3 . 1 119 VAL 5 0 59 0 0.0 -0.3 . 1 120 ASP 4 0 23 0 0.0 -0.3 . 1 121 GLU 5 0 23 0 0.0 -0.3 . 1 122 MET 6 15 55 5 9.1 0.8 . 1 123 ILE 6 0 56 0 0.0 -0.3 . 1 124 ARG 7 0 23 0 0.0 -0.3 . 1 125 GLU 5 0 21 0 0.0 -0.3 . 1 126 ALA 3 0 27 0 0.0 -0.3 . 1 127 ASP 4 0 27 0 0.0 -0.3 . 1 128 ILE 6 0 19 0 0.0 -0.3 . 1 129 ASP 4 0 12 0 0.0 -0.3 . 1 130 GLY 3 0 12 0 0.0 -0.3 . 1 131 ASP 4 0 10 0 0.0 -0.3 . 1 132 GLY 3 0 11 0 0.0 -0.3 . 1 133 GLN 7 0 29 0 0.0 -0.3 . 1 134 VAL 5 0 45 0 0.0 -0.3 . 1 135 ASN 6 0 24 0 0.0 -0.3 . 1 136 TYR 6 0 39 0 0.0 -0.3 . 1 137 GLU 5 0 22 0 0.0 -0.3 . 1 138 GLU 5 0 36 0 0.0 -0.3 . 1 139 PHE 7 0 60 0 0.0 -0.3 . 1 140 VAL 5 0 34 0 0.0 -0.3 . 1 141 GLN 7 0 23 0 0.0 -0.3 . 1 142 MET 6 5 37 0 0.0 -0.3 . 1 143 MET 6 3 52 1 1.9 -0.1 . 1 144 THR 4 0 20 0 0.0 -0.3 . 1 145 ALA 3 0 13 0 0.0 -0.3 . 1 146 LYS 7 0 3 0 0.0 -0.3 . 2 1 ALA 3 13 29 10 34.5 4.0 >sigma 2 2 PHE 7 28 69 16 23.2 2.6 >sigma 2 3 ILE 6 27 66 18 27.3 3.1 >sigma 2 4 ILE 6 22 64 8 12.5 1.2 >sigma 2 5 TRP 10 44 70 20 28.6 3.3 >sigma 2 6 LEU 7 32 65 22 33.8 3.9 >sigma 2 7 ALA 3 20 40 9 22.5 2.5 >sigma 2 8 ARG 7 10 67 6 9.0 0.8 . 2 9 ARG 7 21 42 11 26.2 3.0 >sigma 2 10 LEU 7 21 61 8 13.1 1.3 >sigma 2 11 LYS 7 10 53 6 11.3 1.1 >sigma 2 12 LYS 7 11 36 8 22.2 2.5 >sigma 2 13 GLY 3 8 10 5 50.0 6.0 >sigma 2 14 LYS 7 7 27 4 14.8 1.5 >sigma 2 15 LYS 7 7 11 4 36.4 4.3 >sigma stop_ save_
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