NMR Restraints Grid

Result table
 (Save to zip file containing files for each block)

image mrblock_id pdb_id bmrb_id cing stage program type subtype subsubtype
416007 2ddy 6014 cing 4-filtered-FRED Wattos check stereo assignment distance


data_2ddy


save_assign_stereo
    _Stereo_assign_list.Sf_category          stereo_assignments
    _Stereo_assign_list.Triplet_count        131
    _Stereo_assign_list.Swap_count           19
    _Stereo_assign_list.Swap_percentage      14.5
    _Stereo_assign_list.Deassign_count       38
    _Stereo_assign_list.Deassign_percentage  29.0
    _Stereo_assign_list.Model_count          25
    _Stereo_assign_list.Total_e_low_states   42.313
    _Stereo_assign_list.Total_e_high_states  186.109
    _Stereo_assign_list.Crit_abs_e_diff      0.100
    _Stereo_assign_list.Crit_rel_e_diff      0.000
    _Stereo_assign_list.Crit_mdls_favor_pct  75.0
    _Stereo_assign_list.Crit_sing_mdl_viol   1.000
    _Stereo_assign_list.Crit_multi_mdl_viol  0.500
    _Stereo_assign_list.Crit_multi_mdl_pct   50.0
    _Stereo_assign_list.Details              
;
Description of the tags in this list:
*  1 * NMR-STAR 3 administrative tag
*  2 * NMR-STAR 3 administrative tag
*  3 * NMR-STAR 3 administrative tag
*  4 * Number of triplets (atom-group pair and pseudo)
*  5 * Number of triplets that were swapped
*  6 * Percentage of triplets that were swapped
*  7 * Number of deassigned triplets
*  8 * Percentage of deassigned triplets
*  9 * Number of models in ensemble
* 10 * Energy of the states with the lower energies summed for all triplets (Ang.**2)
* 11 * Energy of the states with the higher energies summed for all triplets (Ang.**2)
* 12 * Item 9-8
* 13 * Criterium for swapping assignment on the absolute energy difference (Ang.**2)
* 14 * Criterium for swapping assignment on the relative energy difference (Ang.**2)
* 15 * Criterium for swapping assignment on the percentage of models favoring a swap
* 16 * Criterium for deassignment on a single model violation (Ang.)
* 17 * Criterium for deassignment on a multiple model violation (Ang.)
* 18 * Criterium for deassignment on a percentage of models
* 19 * this tag

Description of the tags in the table below:
*  1 * Chain identifier (can be absent if none defined)
*  2 * Residue number
*  3 * Residue name
*  4 * Name of pseudoatom representing the triplet
*  5 * Ordinal number of assignment (1 is assigned first)
*  6 * 'yes' if assignment state is swapped with respect to restraint file
*  7 * Percentage of models in which the assignment with the lowest
        overall energy is favoured
*  8 * Percentage of difference between lowest and highest overall energy
        with respect to the highest overall energy
*  9 * Difference between lowest and highest overall energy
* 10 * Energy of the highest overall energy state (Ang.**2)
* 11 * Energy of the lowest overall energy state (Ang.**2)
* 12 * Number of restraints involved with the triplet. The highest ranking
        triplet on this number, is assigned first
* 13 * Number of restraints involved with the triplet that are ambiguous
        besides the ambiguity from this triplet
* 14 * 'yes' if restraints included in this triplet are deassigned
* 15 * Maximum unaveraged violation before deassignment (Ang.)
* 16 * Number of violated restraints above threshold for a single model
        before deassignment (given by Single_mdl_crit_count)
* 17 * Number of violated restraints above threshold for a multiple models
        before deassignment (given by Multi_mdl_crit_count)
* 18 * NMR-STAR 3.0 administrative tag
* 19 * NMR-STAR 3.0 administrative tag
;


    loop_
       _Stereo_assign.Entity_assembly_ID
       _Stereo_assign.Comp_index_ID
       _Stereo_assign.Comp_ID
       _Stereo_assign.Pseudo_Atom_ID
       _Stereo_assign.Num
       _Stereo_assign.Swapped
       _Stereo_assign.Models_favoring_pct
       _Stereo_assign.Energy_difference_pct
       _Stereo_assign.Energy_difference
       _Stereo_assign.Energy_high_state
       _Stereo_assign.Energy_low_state
       _Stereo_assign.Constraint_count
       _Stereo_assign.Constraint_ambi_count
       _Stereo_assign.Deassigned
       _Stereo_assign.Violation_max
       _Stereo_assign.Single_mdl_crit_count
       _Stereo_assign.Multi_mdl_crit_count

       1   9 LYS QB  85 no   48.0   5.2  0.020  0.375 0.355  4  0 no  0.965  0 12 
       1  10 TRP QB  46 no   96.0  75.2  0.203  0.271 0.067  7  3 no  0.580  0  3 
       1  12 SER QB  54 no  100.0   0.0  0.000  0.008 0.008  6  0 no  0.290  0  0 
       1  14 VAL QG   9 no   64.0  72.5  1.050  1.448 0.399 17  0 yes 1.517  4 11 
       1  15 VAL QG   2 no  100.0  99.1  0.245  0.247 0.002 26  7 no  0.499  0  0 
       1  17 TYR QB  38 no  100.0 100.0  0.199  0.199 0.000  8  1 no  0.000  0  0 
       1  17 TYR QD  95 no   64.0  53.2  3.612  6.785 3.172  3  0 yes 3.227  9  9 
       1  17 TYR QE 120 no    4.0  40.2  0.081  0.201 0.120  2  2 no  0.297  0  0 
       1  18 ARG QB  66 no   40.0  80.8  0.109  0.135 0.026  5  1 no  0.717  0  1 
       1  19 ILE QG  12 no   92.0  30.7  0.628  2.050 1.421 13  2 yes 2.151 15 32 
       1  20 VAL QG  89 no   88.0  98.6  1.085  1.101 0.016  4  1 no  0.000  0  0 
       1  21 SER QB  24 no   48.0  18.4  0.150  0.816 0.666 10  3 yes 1.523  2 31 
       1  22 TYR QB  88 no   96.0  97.1  1.150  1.184 0.034  4  1 no  0.307  0  0 
       1  24 ARG QB  53 no   76.0  96.7  0.059  0.061 0.002  6  0 no  0.181  0  0 
       1  25 ASP QB  26 no   96.0  86.2  0.564  0.654 0.090  9  0 no  0.554  0  2 
       1  26 LEU QB  67 no   32.0 100.0  0.010  0.010 0.000  5  2 no  0.000  0  0 
       1  26 LEU QD   3 no   40.0   4.1  0.013  0.326 0.313 26  8 no  0.995  0  9 
       1  27 PRO QB 117 no  100.0 100.0  1.517  1.517 0.000  2  0 no  0.034  0  0 
       1  28 HIS QB 116 no  100.0  79.7  0.607  0.762 0.154  2  0 no  0.643  0  9 
       1  29 ILE QG  25 no   56.0  13.6  0.060  0.442 0.381  9  0 yes 0.871  0 25 
       1  31 VAL QG   5 yes  96.0  83.5  1.536  1.839 0.303 21  5 yes 1.902  1  5 
       1  32 ASP QB  52 no  100.0  65.5  0.897  1.370 0.473  6  0 yes 0.862  0 22 
       1  33 ARG QB  51 yes  96.0  77.8  0.121  0.156 0.034  6  0 no  0.778  0  2 
       1  34 LEU QD  29 no   64.0  13.1  0.024  0.182 0.158  9  4 no  0.867  0  4 
       1  35 VAL QG   4 no   40.0 100.0  0.167  0.167 0.000 24  8 no  0.000  0  0 
       1  37 LYS QG  87 no   52.0  85.7  0.887  1.035 0.148  4  1 no  0.906  0  7 
       1  39 LEU QB  13 no  100.0 100.0  0.246  0.246 0.000 13  5 no  0.000  0  0 
       1  39 LEU QD   1 no   88.0  92.4  3.643  3.944 0.301 29 13 yes 1.242  2  6 
       1  40 ASN QB  64 no   56.0  50.3  0.629  1.251 0.622  5  0 yes 1.139  5 19 
       1  41 MET QB  84 no  100.0  94.8  2.965  3.126 0.161  4  0 no  0.722  0  6 
       1  41 MET QG 115 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1  43 GLY QA  37 no   80.0  19.4  0.037  0.192 0.155  8  1 yes 1.036  1  5 
       1  46 ILE QG  16 no  100.0  89.1  0.984  1.105 0.121 11  1 no  0.535  0  1 
       1  48 LEU QB  23 no   96.0  97.0  0.119  0.123 0.004 10  2 no  0.213  0  0 
       1  48 LEU QD   6 no  100.0  99.0  1.756  1.773 0.017 21  6 no  0.417  0  0 
       1  49 HIS QB 114 no  100.0  97.3  0.946  0.972 0.026  2  0 no  0.343  0  0 
       1  50 PHE QB  36 yes  96.0  82.7  0.156  0.188 0.032  8  1 no  0.499  0  0 
       1  50 PHE QD 128 no   64.0  77.8  1.854  2.383 0.528  1  0 yes 2.866 14 16 
       1  50 PHE QE  99 no   64.0  23.1  0.276  1.197 0.921  3  3 no  0.575  0  2 
       1  52 LYS QB 127 no  100.0 100.0  0.021  0.021 0.000  1  0 no  0.000  0  0 
       1  52 LYS QG  50 no  100.0  98.0  0.807  0.824 0.016  6  0 no  0.207  0  0 
       1  53 VAL QG  58 yes  92.0  99.9  0.606  0.606 0.000  6  1 no  0.074  0  0 
       1  54 VAL QG  15 no    8.0 100.0  0.000  0.000 0.000 11  0 no  0.000  0  0 
       1  56 GLY QA  94 no  100.0   0.0  0.000  0.000 0.000  3  0 no  0.000  0  0 
       1  59 ASP QB  65 yes  96.0  45.1  0.578  1.284 0.705  5  1 yes 1.047  1 25 
       1  61 MET QB  83 yes  88.0  91.9  2.458  2.674 0.216  4  0 yes 1.064  2  7 
       1  63 GLY QA  40 no  100.0  84.9  0.882  1.038 0.156  8  2 no  0.484  0  0 
       1  64 PHE QB  82 no   96.0  98.3  2.194  2.232 0.038  4  0 no  0.752  0  2 
       1  64 PHE QD 131 no   72.0  27.6  0.084  0.303 0.219  1  1 no  0.947  0  1 
       1  67 GLY QA 113 yes 100.0 100.0  0.165  0.165 0.000  2  0 no  0.000  0  0 
       1  70 GLY QA 112 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1  72 SER QB  93 no   60.0  87.8  0.038  0.043 0.005  3  0 no  0.630  0  1 
       1  73 TYR QB  81 no  100.0  96.6  0.693  0.717 0.024  4  0 no  0.401  0  0 
       1  74 PRO QB  49 no   84.0  29.6  0.025  0.085 0.060  6  0 no  0.943  0  2 
       1  75 PHE QB  63 no  100.0  70.7  0.127  0.179 0.052  5  0 no  0.508  0  1 
       1  75 PHE QD 111 yes 100.0  98.4  7.977  8.105 0.128  2  0 no  0.741  0  4 
       1  75 PHE QE 110 yes 100.0 100.0 19.252 19.261 0.010  2  0 no  0.339  0  0 
       1  76 ASP QB 109 no  100.0  86.8  0.031  0.036 0.005  2  0 no  0.344  0  0 
       1  77 GLY QA  92 no   40.0  79.8  0.027  0.034 0.007  3  0 no  0.281  0  0 
       1  79 GLY QA  80 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.000  0  0 
       1  80 ASN QB 108 no   76.0  98.6  0.702  0.712 0.010  2  0 no  0.300  0  0 
       1  82 LEU QB  28 no  100.0  84.1  0.323  0.384 0.061  9  4 no  0.408  0  0 
       1  82 LEU QD   7 yes  84.0  59.6  1.105  1.854 0.749 21  7 yes 1.555  9 13 
       1  84 HIS QB  79 no  100.0  98.4  1.144  1.162 0.018  4  0 no  0.152  0  0 
       1  86 PHE QB  60 no   48.0   1.6  0.004  0.280 0.276  6  6 no  0.453  0  0 
       1  88 PRO QD 118 no  100.0  65.7  1.760  2.678 0.917  2  1 no  0.315  0  0 
       1  88 PRO QG 126 no  100.0  99.1  2.192  2.213 0.020  1  0 no  0.346  0  0 
       1  89 GLY QA  98 no   44.0  34.5  0.317  0.917 0.601  3  1 yes 1.531  7 24 
       1  92 LEU QB  30 yes 100.0  87.4  4.311  4.935 0.624  9  6 yes 0.803  0 29 
       1  92 LEU QD  20 no   48.0  90.5  0.037  0.041 0.004 11  6 no  0.313  0  0 
       1  93 GLY QA  22 no  100.0  95.3  3.264  3.425 0.161 10  2 no  0.631  0  6 
       1  94 GLY QA  43 no  100.0  88.8  0.453  0.510 0.057  7  0 no  0.401  0  0 
       1  95 ASP QB 125 no  100.0 100.0  0.000  0.000 0.000  1  0 no  0.005  0  0 
       1  97 HIS QB  42 yes  92.0  66.9  1.586  2.370 0.784  7  0 yes 0.918  0 36 
       1  98 PHE QB  35 no  100.0  90.7  2.134  2.352 0.219  8  0 no  0.969  0  4 
       1  98 PHE QD  78 no  100.0  99.8 15.469 15.497 0.028  4  0 no  0.244  0  0 
       1  98 PHE QE  91 no  100.0 100.0 10.804 10.804 0.000  3  0 no  0.000  0  0 
       1  99 ASP QB  34 no  100.0  54.0  1.761  3.258 1.497  8  0 yes 1.635 12 42 
       1 100 GLU QB  33 yes  84.0  26.6  0.206  0.774 0.568  8  0 yes 1.188  3 18 
       1 101 ASP QB  77 yes 100.0  94.9  0.463  0.488 0.025  4  0 no  0.360  0  0 
       1 102 GLU QB  14 no   72.0  37.9  0.473  1.247 0.774 12  2 yes 1.586  8 31 
       1 102 GLU QG  57 no   68.0  30.1  1.098  3.652 2.554  6  1 yes 2.074 21 51 
       1 103 ARG QB  48 no   60.0  12.0  0.140  1.164 1.024  6  0 yes 1.248 16 29 
       1 106 ASP QB  45 yes  88.0  80.9  0.107  0.132 0.025  7  2 no  0.386  0  0 
       1 107 GLY QA  56 no   84.0  57.8  0.946  1.637 0.691  6  1 yes 1.331  5 24 
       1 108 SER QB 107 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 110 LEU QB  44 no   68.0  59.7  0.157  0.263 0.106  7  2 no  0.746  0  4 
       1 110 LEU QD  68 no   88.0  12.6  0.002  0.017 0.015  5  3 no  0.311  0  0 
       1 111 GLY QA  21 no  100.0   3.5  0.000  0.008 0.008 10  1 no  0.256  0  0 
       1 112 ILE QG 106 no   68.0  84.8  0.043  0.051 0.008  2  0 no  0.586  0  1 
       1 113 ASN QB  97 no   96.0  93.6  1.721  1.839 0.118  3  1 no  0.219  0  0 
       1 114 PHE QB  59 no   96.0  79.2  0.585  0.739 0.154  6  2 no  0.995  0  7 
       1 115 LEU QB  55 yes  92.0  84.8  0.582  0.686 0.104  6  1 no  0.927  0  2 
       1 115 LEU QD  19 no   84.0  66.4  0.271  0.408 0.137 11  6 yes 1.851  1  1 
       1 122 LEU QB  17 no  100.0  79.8  1.397  1.751 0.353 11  2 yes 0.754  0 16 
       1 123 GLY QA  47 no   76.0  41.3  0.042  0.102 0.060  6  0 no  0.558  0  1 
       1 124 HIS QB  76 no  100.0 100.0  0.383  0.383 0.000  4  0 no  0.000  0  0 
       1 126 LEU QD   8 no  100.0  70.9  2.545  3.593 1.047 18  5 yes 2.010  9 20 
       1 127 GLY QA  75 no  100.0   0.0  0.000  0.000 0.000  4  0 no  0.007  0  0 
       1 129 GLY QA 105 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 130 HIS QB 104 no  100.0  80.8  0.298  0.369 0.071  2  0 no  0.513  0  2 
       1 133 ASP QB  74 yes 100.0  96.5  5.101  5.286 0.185  4  0 no  0.837  0  3 
       1 135 ASN QB  73 no   92.0  79.4  0.716  0.902 0.186  4  0 no  0.829  0  3 
       1 137 VAL QG  41 no   20.0 100.0  0.010  0.010 0.000  7  0 no  0.000  0  0 
       1 138 MET QB  72 yes 100.0 100.0  0.297  0.297 0.000  4  0 no  0.000  0  0 
       1 139 TYR QB  71 no   84.0  61.1  0.357  0.584 0.227  4  0 yes 1.431  2  6 
       1 142 TYR QB 124 no  100.0   0.0  0.000  0.000 0.000  1  0 no  0.000  0  0 
       1 143 GLY QA  70 no   64.0  30.6  0.032  0.106 0.073  4  0 no  0.597  0  4 
       1 144 ASN QB  69 no   44.0  12.0  0.022  0.179 0.157  4  0 no  0.789  0  4 
       1 145 GLY QA 103 no  100.0   0.0  0.000  0.000 0.000  2  0 no  0.000  0  0 
       1 149 ASN QB  86 no   60.0  50.6  0.069  0.136 0.067  4  1 no  0.634  0  3 
       1 149 ASN QD  96 no   60.0  59.2  0.923  1.560 0.637  3  1 yes 1.743  9 12 
       1 150 PHE QD 123 no   56.0  92.1  0.321  0.348 0.027  1  0 no  0.425  0  0 
       1 150 PHE QE 119 no   48.0  74.4  0.398  0.535 0.137  2  2 no  0.000  0  0 
       1 151 LYS QB  90 no   56.0   6.7  0.073  1.079 1.007  3  0 yes 1.457 11 21 
       1 151 LYS QD 102 no   36.0  53.6  0.059  0.110 0.051  2  0 no  0.598  0  1 
       1 152 LEU QD  11 yes  76.0  78.6  0.624  0.794 0.170 14  0 no  0.913  0  3 
       1 154 GLN QB 130 no   96.0  47.6  3.665  7.694 4.029  1  1 yes 1.630  2 20 
       1 155 ASP QB 101 no   40.0  20.6  0.092  0.444 0.352  2  0 yes 0.888  0 17 
       1 156 ASP QB  62 no   80.0  75.5  0.090  0.120 0.029  5  0 no  0.535  0  4 
       1 158 LYS QB  27 no   64.0   7.9  0.359  4.552 4.194  9  2 yes 2.876 23 26 
       1 159 GLY QA  39 no   92.0  45.0  0.688  1.530 0.842  8  2 yes 2.146  3 24 
       1 161 GLN QB 122 no   60.0  61.7  0.214  0.346 0.133  1  0 yes 1.196  5  8 
       1 161 GLN QG 100 no   56.0  17.8  0.010  0.056 0.046  2  0 no  0.549  0  2 
       1 162 LYS QB 129 no   96.0  74.6  1.984  2.659 0.675  1  1 no  0.354  0  0 
       1 163 LEU QB  10 no   72.0   5.1  0.023  0.448 0.426 15  4 yes 1.019  1 16 
       1 163 LEU QD  18 no   44.0  51.9  0.200  0.386 0.186 11  4 yes 1.179  3  4 
       1 164 TYR QB  32 no   64.0   3.6  0.030  0.833 0.802  8  0 yes 1.304  7 23 
       1 164 TYR QD 121 no   88.0  81.0  3.542  4.371 0.829  1  0 yes 2.732  3  3 
       1 165 GLY QA  61 no   96.0  88.8  0.026  0.030 0.003  5  0 no  0.419  0  0 
       1 166 LYS QB  31 no   92.0  82.5  0.475  0.576 0.101  8  0 no  0.654  0  2 
    stop_

save_



Please acknowledge these references in publications where the data from this site have been utilized.

Contact the webmaster for help, if required. Sunday, May 19, 2024 8:55:16 AM GMT (wattos1)