BMRB Entry 862

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR862

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Hydrogen-1 Nuclear Magnetic Resonance Investigation of Bovine Cardiac Troponin C. Comparison of Tyrosyl Assignments and Calcium-Induced Structural Changes to Those of Two Homologous Proteins, Rabbit Skeletal Troponin C and Bovine Brain Calm

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Hincke, Maxwell; Sykes, Brian; Kay, Cyril

Citation:

Citation: Hincke, Maxwell; Sykes, Brian; Kay, Cyril. "Hydrogen-1 Nuclear Magnetic Resonance Investigation of Bovine Cardiac Troponin C. Comparison of Tyrosyl Assignments and Calcium-Induced Structural Changes to Those of Two Homologous Proteins, Rabbit Skeletal Troponin C and Bovine Brain Calm" Biochemistry 20, 3286-3294 (1981).

Assembly members:

Assembly members:
troponin C, polymer, 160 residues, Formula weight is not available

Natural source:

Natural source: Common Name: cow Taxonomy ID: 9909 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bos primigenius

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
troponin C: XDDIYKAAVEQLTEEQKNEF KAAFDIFVLGAEDGCISTKE LGKVMRMLGQNPTPEELQEM IDEVDEDGSGTVDFDEFLVM MVRCMKDDSKGKSEEELSDL FRMFDKNADGYIDLELKIML QATGETITEDDIEELMKDGD KNNDGRIDYDEFLEFMKGVE

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
1H chemical shifts	12

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	troponin C	1

Entities:

Entity 1, troponin C 160 residues - Formula weight is not available

1	AME	ASP	ASP	ILE	TYR	LYS	ALA	ALA	VAL	GLU
2	GLN	LEU	THR	GLU	GLU	GLN	LYS	ASN	GLU	PHE
3	LYS	ALA	ALA	PHE	ASP	ILE	PHE	VAL	LEU	GLY
4	ALA	GLU	ASP	GLY	CYS	ILE	SER	THR	LYS	GLU
5	LEU	GLY	LYS	VAL	MET	ARG	MET	LEU	GLY	GLN
6	ASN	PRO	THR	PRO	GLU	GLU	LEU	GLN	GLU	MET
7	ILE	ASP	GLU	VAL	ASP	GLU	ASP	GLY	SER	GLY
8	THR	VAL	ASP	PHE	ASP	GLU	PHE	LEU	VAL	MET
9	MET	VAL	ARG	CYS	MET	LYS	ASP	ASP	SER	LYS
10	GLY	LYS	SER	GLU	GLU	GLU	LEU	SER	ASP	LEU
11	PHE	ARG	MET	PHE	ASP	LYS	ASN	ALA	ASP	GLY
12	TYR	ILE	ASP	LEU	GLU	LEU	LYS	ILE	MET	LEU
13	GLN	ALA	THR	GLY	GLU	THR	ILE	THR	GLU	ASP
14	ASP	ILE	GLU	GLU	LEU	MET	LYS	ASP	GLY	ASP
15	LYS	ASN	ASN	ASP	GLY	ARG	ILE	ASP	TYR	ASP
16	GLU	PHE	LEU	GLU	PHE	MET	LYS	GLY	VAL	GLU

Samples:

sample_one:

sample_condition_set_one: pH: 6.8 na; temperature: 301 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

BMRB	15385 15388 15400 15427 16190 16752 17103 19789 25034 25035 25120 4822 4823 846 934
PDB	1AJ4 1AP4 1DTL 1FI5 1J1D 1J1E 1LA0 1LXF 1MXL 1SBJ 1SCV 1SPY 1WRK 1WRL 2CTN 2JT0 2JT3 2JT8 2JTZ 2JXL 2KFX 2KGB 2KRD 2L1R 2MKP 3SD6 3SWB 4GJE
DBJ	BAA02369 BAG36483
EMBL	CAA30736 CAG46663 CAG46683
GB	AAA36772 AAA37492 AAA37493 AAA48654 AAB91994
PIR	TPHUCC
PRF	1510257A 750650A
REF	NP_001029277 NP_001029523 NP_001123715 NP_001272501 NP_003271
SP	P02591 P09860 P19123 P63315 P63316
TPG	DAA16908
AlphaFold	P02591 P09860 P19123 P63315 P63316

1	AME	ASP	ASP	ILE	TYR	LYS	ALA	ALA	VAL	GLU
2	GLN	LEU	THR	GLU	GLU	GLN	LYS	ASN	GLU	PHE
3	LYS	ALA	ALA	PHE	ASP	ILE	PHE	VAL	LEU	GLY
4	ALA	GLU	ASP	GLY	CYS	ILE	SER	THR	LYS	GLU
5	LEU	GLY	LYS	VAL	MET	ARG	MET	LEU	GLY	GLN
6	ASN	PRO	THR	PRO	GLU	GLU	LEU	GLN	GLU	MET
7	ILE	ASP	GLU	VAL	ASP	GLU	ASP	GLY	SER	GLY
8	THR	VAL	ASP	PHE	ASP	GLU	PHE	LEU	VAL	MET
9	MET	VAL	ARG	CYS	MET	LYS	ASP	ASP	SER	LYS
10	GLY	LYS	SER	GLU	GLU	GLU	LEU	SER	ASP	LEU
11	PHE	ARG	MET	PHE	ASP	LYS	ASN	ALA	ASP	GLY
12	TYR	ILE	ASP	LEU	GLU	LEU	LYS	ILE	MET	LEU
13	GLN	ALA	THR	GLY	GLU	THR	ILE	THR	GLU	ASP
14	ASP	ILE	GLU	GLU	LEU	MET	LYS	ASP	GLY	ASP
15	LYS	ASN	ASN	ASP	GLY	ARG	ILE	ASP	TYR	ASP
16	GLU	PHE	LEU	GLU	PHE	MET	LYS	GLY	VAL	GLU

1	AME	ASP	ASP	ILE	TYR	LYS	ALA	ALA	VAL	GLU
2	GLN	LEU	THR	GLU	GLU	GLN	LYS	ASN	GLU	PHE
3	LYS	ALA	ALA	PHE	ASP	ILE	PHE	VAL	LEU	GLY
4	ALA	GLU	ASP	GLY	CYS	ILE	SER	THR	LYS	GLU
5	LEU	GLY	LYS	VAL	MET	ARG	MET	LEU	GLY	GLN
6	ASN	PRO	THR	PRO	GLU	GLU	LEU	GLN	GLU	MET
7	ILE	ASP	GLU	VAL	ASP	GLU	ASP	GLY	SER	GLY
8	THR	VAL	ASP	PHE	ASP	GLU	PHE	LEU	VAL	MET
9	MET	VAL	ARG	CYS	MET	LYS	ASP	ASP	SER	LYS
10	GLY	LYS	SER	GLU	GLU	GLU	LEU	SER	ASP	LEU
11	PHE	ARG	MET	PHE	ASP	LYS	ASN	ALA	ASP	GLY
12	TYR	ILE	ASP	LEU	GLU	LEU	LYS	ILE	MET	LEU
13	GLN	ALA	THR	GLY	GLU	THR	ILE	THR	GLU	ASP
14	ASP	ILE	GLU	GLU	LEU	MET	LYS	ASP	GLY	ASP
15	LYS	ASN	ASN	ASP	GLY	ARG	ILE	ASP	TYR	ASP
16	GLU	PHE	LEU	GLU	PHE	MET	LYS	GLY	VAL	GLU