BMRB Entry 7285

Name: 1H, 13C and 15N assignments for a double dockerin domain
Published: 2007-10-09

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PDB ID: 2j4m
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7285
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N assignments for a double dockerin domain

Deposition date:

2006-09-01

Original release date:

2007-10-09

Authors:

Tunnicliffe, Richard; Williamson, Mike; Higgins, Lee

Citation:

Citation: Nagy, Tibor; Tunnicliffe, Richard; Higgins, Lee; Walters, Chris; Gilbert, Harry; Williamson, Mike. "Characterization of a double dockerin from the cellulosome of the anaerobic fungus Piromyces equi" J. Mol. Biol. 373, 612-622 (2007).
PubMed: 17869267

Assembly members:

Assembly members:
double dockerin, polymer, 96 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Piromyces equi Taxonomy ID: 99929 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Piromyces equi

Experimental source:

Experimental source: Production method: recombinant technology Vector: pGEX-4T-2

Entity Sequences (FASTA):

Entity Sequences (FASTA):
double dockerin: MACWAQSQGYNCCNNPSSTK VEYTDASGQWGVQNGQWCGI DYSYGQNQGNESCTGNGSYP CCNTCQATYTDGDGDWAFEN GNWCGIKNSCKQQPQN

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	375
15N chemical shifts	118
1H chemical shifts	571

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	double dockerin	1

Entities:

Entity 1, double dockerin 96 residues - Formula weight is not available

1

MET

ALA

CYS

TRP

ALA

GLN

SER

GLN

GLY

TYR

2

ASN

CYS

ASN

PRO

SER

THR

LYS

3

VAL

GLU

TYR

THR

ASP

ALA

SER

GLY

GLN

TRP

4

GLY

VAL

GLN

ASN

GLY

GLN

TRP

CYS

GLY

ILE

5

ASP

TYR

SER

TYR

GLY

GLN

ASN

GLN

GLY

ASN

6

GLU

SER

CYS

THR

GLY

ASN

GLY

SER

TYR

PRO

7

CYS

ASN

THR

CYS

GLN

ALA

THR

TYR

THR

8

ASP

GLY

ASP

GLY

ASP

TRP

ALA

PHE

GLU

ASN

9

GLY

ASN

TRP

CYS

GLY

ILE

LYS

ASN

SER

CYS

10

LYS

GLN

PRO

GLN

ASN

Samples:

sample_1: double dockerin, [U-95% 13C; U-90% 15N], 0.8 mM; sodium phosphate 50 mM

conditions_1: pH: 6.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 15N-1H	sample_1	not available	conditions_1
13C-1H HSQC	sample_1	not available	conditions_1
3D HNCO	sample_1	not available	conditions_1
HN(CA)CO	sample_1	not available	conditions_1
CBCA(CO)NH	sample_1	not available	conditions_1
HNCACB	sample_1	not available	conditions_1
HNCA	sample_1	not available	conditions_1
HCCH-TOCSYm	sample_1	not available	conditions_1
CCH-TOCSY	sample_1	not available	conditions_1
13C/15N-edited NOESY	sample_1	not available	conditions_1

Software:

FELIX v2004, Accelrys Inc -

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz
Bruker DRX 800 MHz