BMRB Entry 6587

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6587

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Title:
1H, 13C and 15N backbone resonance assignments of apolipoprotein A-I in lipid-mimetic solution
Deposition date:
2005-04-12
Original release date:
2005-04-26
Authors:
Okon, Mark; Frank, Philippe; Marcel, Yves; Cushley, Robert
Citation:

Citation: Okon, Mark; Frank, Philippe; Marcel, Yves; Cushley, Robert. "Heteronuclear NMR studies of human serum apolipoprotein A-I. Part I. Secondary structure in lipid-mimetic solution"  FEBS Lett. 517, 139-143 (2002).
PubMed: 12062424

Assembly members:

Assembly members:
apolipoprotein A-I, polymer, 243 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
apolipoprotein A-I: DEPPQSPWDRVKDLATVYVD VLKDSGRDYVSQFEGSALGK QLNLKLLDNWDSVTSTFSKL REQLGPVTQEFWDNLEKETE GLRQEMSKDLEEVKAKVQPY LDDFQKKWQEEMELYRQKVE PLRAELQEGARQKLHELQEK LSPLGEEMRDRARAHVDALR THLAPYSDELRQRLAARLEA LKENGGARLAEYHAKATEHL STLSEKAKPALEDLRQGLLP VLESFKVSFLSALEEYTKKL NTQ

Data sets:
Data typeCount
13C chemical shifts460
15N chemical shifts228
1H chemical shifts445

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1apolipoprotein A-I1

Entities:

Entity 1, apolipoprotein A-I 243 residues - Formula weight is not available

1   ASPGLUPROPROGLNSERPROTRPASPARG
2   VALLYSASPLEUALATHRVALTYRVALASP
3   VALLEULYSASPSERGLYARGASPTYRVAL
4   SERGLNPHEGLUGLYSERALALEUGLYLYS
5   GLNLEUASNLEULYSLEULEUASPASNTRP
6   ASPSERVALTHRSERTHRPHESERLYSLEU
7   ARGGLUGLNLEUGLYPROVALTHRGLNGLU
8   PHETRPASPASNLEUGLULYSGLUTHRGLU
9   GLYLEUARGGLNGLUMETSERLYSASPLEU
10   GLUGLUVALLYSALALYSVALGLNPROTYR
11   LEUASPASPPHEGLNLYSLYSTRPGLNGLU
12   GLUMETGLULEUTYRARGGLNLYSVALGLU
13   PROLEUARGALAGLULEUGLNGLUGLYALA
14   ARGGLNLYSLEUHISGLULEUGLNGLULYS
15   LEUSERPROLEUGLYGLUGLUMETARGASP
16   ARGALAARGALAHISVALASPALALEUARG
17   THRHISLEUALAPROTYRSERASPGLULEU
18   ARGGLNARGLEUALAALAARGLEUGLUALA
19   LEULYSGLUASNGLYGLYALAARGLEUALA
20   GLUTYRHISALALYSALATHRGLUHISLEU
21   SERTHRLEUSERGLULYSALALYSPROALA
22   LEUGLUASPLEUARGGLNGLYLEULEUPRO
23   VALLEUGLUSERPHELYSVALSERPHELEU
24   SERALALEUGLUGLUTYRTHRLYSLYSLEU
25   ASNTHRGLN

Samples:

sample_1: apolipoprotein A-I, [U-13C; U-15N], 2 mM; SDS 280 mM

conditions_1: pH: 6.4; temperature: 312 K

Experiments:

NameSampleSample stateSample conditions
1H15N_HSQCsample_1not availableconditions_1
15N_edited_1H_NOESY_HSQCsample_1not availableconditions_1
15N-edited NOESY-HSQCsample_1not availableconditions_1
15N/15N-edited NOESY-HSQCsample_1not availableconditions_1
NOESY-HSQCsample_1not availableconditions_1
HNCOsample_1not availableconditions_1
HNCAsample_1not availableconditions_1
HN(CO)CAsample_1not availableconditions_1
CBCA(CO)NHsample_1not availableconditions_1
HN(COCA)HAsample_1not availableconditions_1
15N/15N-edited NOESY-HSQCsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker AMX 600 MHz

Related Database Links:

BMRB 15093 6588
PDB
DBJ BAF84920 BAI46675
EMBL CAA25232 CAA25519 CAA26097 CAA30377
GB AAA35545 AAA51747 AAA62829 AAB59514 AAH05380
REF NP_000030 XP_001153383 XP_001153517 XP_003253233 XP_003253235
SP G3QY98 P02647 P0DJG0 P0DJG1 P0DM91
AlphaFold G3QY98 P02647 P0DJG0 P0DJG1 P0DM91

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks