BMRB Entry 6360
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6360
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Sforca, Mauricio; Machado, Alessandra; Figueredo, Rita; Oyama, Sergio; Silva, Fernanda; Miranda, Antonio; Daffre, Sirlei; Miranda, M.; Spisni, Alberto; Pertinhez, Thelma. "The micelle-bound structure of an antimicrobial peptide derived from the
alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus." Biochemistry 44, 6440-6451 (2005).
PubMed: 15850378
Assembly members:
amidated fragment (40-61) of bovine alpha-hemoglobin, polymer, 23 residues, 2412.7 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: unclassified Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
amidated fragment (40-61) of bovine alpha-hemoglobin: KTYFPHFDLSHGSAQVKGHG
AKX
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 124 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | fragment 40-61 amidated | 1 |
Entities:
Entity 1, fragment 40-61 amidated 23 residues - 2412.7 Da.
| 1 | LYS | THR | TYR | PHE | PRO | HIS | PHE | ASP | LEU | SER | ||||
| 2 | HIS | GLY | SER | ALA | GLN | VAL | LYS | GLY | HIS | GLY | ||||
| 3 | ALA | LYS | NH2 |
Samples:
sample_1: amidated fragment (40-61) of bovine alpha-hemoglobin 1.0 mM
Ex-cond_1: pH: 4.0; temperature: 310 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H DQF-COSY | sample_1 | not available | Ex-cond_1 |
| 1H TOCSY | sample_1 | not available | Ex-cond_1 |
| 1H-NOESY | sample_1 | not available | Ex-cond_1 |
| 1H ROESY | sample_1 | not available | Ex-cond_1 |
Software:
NMRrpipe v5 -
NMRView v5 -
DYANA v1.5 -
NMR spectrometers:
- Varian Inova 500 MHz
Related Database Links:
| BMRB | 1101 16891 16898 25 2707 2709 2868 3442 5809 6048 6413 907 |
| PDB | |
| DBJ | BAD97112 BAJ20323 |
| EMBL | CAA23748 CAA23749 CAA23750 CAA23752 CAA23774 |
| GB | AAA30909 AAA30910 AAA36844 AAA52631 AAB22948 |
| PIR | A24693 HAMQR |
| PRF | 0907233A 1004268B 1004272A 1004272B 1509322A |
| REF | NP_000508 NP_000549 NP_001036091 NP_001036092 NP_001038189 |
| SP | P01923 P01924 P01926 P01928 P01929 |
| TPG | DAA15749 |
| AlphaFold | P01923 P01924 P01926 P01928 P01929 |