BMRB Entry 4914

Name: Backbone 1H chemical shift assignments for vMIP-II
Published: 2001-01-23

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PDB ID: 1hff
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4914
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H chemical shift assignments for vMIP-II

Deposition date:

2000-12-12

Original release date:

2001-01-23

Authors:

Crump, Matthew; Elisseeva, Elena; Gong, Jiang-Hong; Clark-Lewis, Ian; Sykes, Brian

Citation:

Citation: Crump, Matthew; Elisseeva, Elena; Gong, Jiang-Hong; Clark-Lewis, Ian; Sykes, Brian. "Structure/Function of Human Herpesvirus-8 MIP-II (1-71) and the Antagonist N-terminal Segment (1-10)" FEBS Lett. 489, 171-175 (2001).
PubMed: 11165244

Assembly members:

Assembly members:
vMIP-II, polymer, 71 residues, Formula weight is not available

Natural source:

Natural source: Common Name: HHV-8 (Kapsoi's sarcoma-associated herpesvirus) Taxonomy ID: not available Superkingdom: Viruses Kingdom: not available Genus/species: Herpesvirus not available

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
vMIP-II: LGASWHRPDKCCLGYQKRPL PQVLLSSWYPTSQLCSKPGV IFLTKRGRQVCADKSKDWVK KLMQQLPVTAR

Data sets:

assigned_chemical_shifts
- CSR_1

Data type	Count
1H chemical shifts	506

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	vMIP-II subunit 1 monomer	1

Entities:

Entity 1, vMIP-II subunit 1 monomer 71 residues - Formula weight is not available

1

LEU

GLY

ALA

SER

TRP

HIS

ARG

PRO

ASP

LYS

2

CYS

LEU

GLY

TYR

GLN

LYS

ARG

PRO

LEU

3

PRO

GLN

VAL

LEU

SER

TRP

TYR

PRO

4

THR

SER

GLN

LEU

CYS

SER

LYS

PRO

GLY

VAL

5

ILE

PHE

LEU

THR

LYS

ARG

GLY

ARG

GLN

VAL

6

CYS

ALA

ASP

LYS

SER

LYS

ASP

TRP

VAL

LYS

7

LYS

LEU

MET

GLN

LEU

PRO

VAL

THR

ALA

8

ARG

Samples:

Sample_1: vMIP-II mM

cond_1: pH: 5; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
COSY	not available	not available	not available
TOCSY	not available	not available	not available
NOESY	not available	not available	not available

Software:

PIPP - Automated peak assignment with model chemokine structures.

NMR spectrometers:

Varian Unity 600 MHz
Varian Inova 500 MHz
Varian Inova 600 MHz

BMRB	4852
PDB	1CM9 1HFG 1HFN 1HHV 1VMP 2FHT 2FJ2
GB	AAB61702 AAB62642 AAC34941 AAC57093 ABD28861
REF	YP_001129362
SP	Q98157
AlphaFold	Q98157 Q98157 Q98157