BMRB Entry 4878

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4878

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Title:
Three-dimensional Structure Topology of the Calreticulin P-domain based on NMR Assignment
Deposition date:
2000-10-24
Original release date:
2001-03-12
Authors:
Ellgaard, Lars; Riek, Roland; Braun, Daniel; Herrmann, Torsten; Helenius, Ari; Wuthrich, Kurt
Citation:

Citation: Ellgaard, Lars; Riek, Roland; Braun, Daniel; Herrmann, Torsten; Helenius, Ari; Wuthrich, Kurt. "Three-dimensional Structure Topology of the Calreticulin P-domain based on NMR Assignment"  FEBS Lett. 488, 69-73 (2000).
PubMed: 11163798

Assembly members:

Assembly members:
Calreticulin, polymer, 100 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Norway rat   Taxonomy ID: 10116   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rattus norvegicus

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Calreticulin: KKIKDPDAAKPEDWDERAKI DDPTDSKPEDWDKPEHIPDP DAKKPEDWDEEMDGEWEPPV IQNPEYKGEWKPRQIDNPDY KGTWIHPEIDNPEYSPDANI

Data sets:
Data typeCount
1H chemical shifts665
13C chemical shifts328
15N chemical shifts95

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1CRT1

Entities:

Entity 1, CRT 100 residues - Formula weight is not available

1   LYSLYSILELYSASPPROASPALAALALYS
2   PROGLUASPTRPASPGLUARGALALYSILE
3   ASPASPPROTHRASPSERLYSPROGLUASP
4   TRPASPLYSPROGLUHISILEPROASPPRO
5   ASPALALYSLYSPROGLUASPTRPASPGLU
6   GLUMETASPGLYGLUTRPGLUPROPROVAL
7   ILEGLNASNPROGLUTYRLYSGLYGLUTRP
8   LYSPROARGGLNILEASPASNPROASPTYR
9   LYSGLYTHRTRPILEHISPROGLUILEASP
10   ASNPROGLUTYRSERPROASPALAASNILE

Samples:

CRT100: Calreticulin, {U-13C; U-15N], 1.5 – 3 mM

Cond1: pH: 6.3; temperature: 293 K

Experiments:

NameSampleSample stateSample conditions
HNCAnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
15N resolved 1H,1H NOESYnot availablenot availablenot available
13C resolved 1H,1H NOESYnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available

Software:

XEASY -

DYANA -

NMR spectrometers:

  • Bruker DRX 750 MHz
  • Bruker DRX 800 MHz
  • Bruker DRX 600 MHz

Related Database Links:

BMRB 17224 5204
PDB
DBJ BAA11345 BAC35852 BAD96780 BAE01267 BAE22866
EMBL CAA33053 CAA37446 CAA55890 CAG33351
GB AAA31188 AAA36582 AAA37569 AAA51916 AAB20096
REF NP_001075704 NP_001167604 NP_001231051 NP_001248060 NP_001274539
SP P14211 P15253 P18418 P27797 P28491
AlphaFold P14211 P15253 P18418 P27797 P28491

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks