BMRB Entry 4759

Click here to enlarge.

PDB ID: 1qpu
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4759
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Backbone 1H, 15N and 13Calpha assigned chemical shifts for reduced Escherichia coli cytochrome b562

Deposition date:

2000-06-12

Original release date:

2000-07-21

Authors:

Assfalg, Michael; Banci, Lucia; Bertini, Ivano

Citation:

Citation: Assfalg, Michael; Banci, Lucia; Bertini, Ivano. "Backbone 1H, 15N and 13Calpha assigned chemical shifts for reduced Escherichia coli cytochrome b56" The BMRB entry is the only known published source for the data. (2000).

Assembly members:

Assembly members:
cytochrome b562, polymer, 106 residues, Formula weight is not available
HEM, non-polymer, 616.487 Da.

Natural source:

Natural source: Common Name: Escherichia coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cytochrome b562: ADLEDNMETLNDNLKVIEKA DNAAQVKDALTKMRAAALDA QKATPPKLEDKSPDSPEMKD FRHGFDILVGQIDDALKLAN EGKVKEAQAAAEQLKTTRNA YHQKYR

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	92
15N chemical shifts	89
1H chemical shifts	89

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	cytochrome b562	1
2	Fe-heme	2

Entities:

Entity 1, cytochrome b562 106 residues - Formula weight is not available

1

ALA

ASP

LEU

GLU

ASP

ASN

MET

GLU

THR

LEU

2

ASN

ASP

ASN

LEU

LYS

VAL

ILE

GLU

LYS

ALA

3

ASP

ASN

ALA

GLN

VAL

LYS

ASP

ALA

LEU

4

THR

LYS

MET

ARG

ALA

LEU

ASP

ALA

5

GLN

LYS

ALA

THR

PRO

LYS

LEU

GLU

ASP

6

LYS

SER

PRO

ASP

SER

PRO

GLU

MET

LYS

ASP

7

PHE

ARG

HIS

GLY

PHE

ASP

ILE

LEU

VAL

GLY

8

GLN

ILE

ASP

ALA

LEU

LYS

LEU

ALA

ASN

9

GLU

GLY

LYS

VAL

LYS

GLU

ALA

GLN

ALA

10

ALA

GLU

GLN

LEU

LYS

THR

ARG

ASN

ALA

11

TYR

HIS

GLN

LYS

TYR

ARG

Entity 2, Fe-heme - C34 H32 Fe N4 O4 - 616.487 Da.

1

HEM

Samples:

sample_1: cytochrome b562, [U-13C; U-15N], 2.0 mM

Ex-cond_1: pH: 4.8; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
NOESY	sample_1	not available	Ex-cond_1
1H-15N HMQC-NOESY	sample_1	not available	Ex-cond_1
HCCH-TOCSY	sample_1	not available	Ex-cond_1
HNCA	sample_1	not available	Ex-cond_1
HN(CO)CA	sample_1	not available	Ex-cond_1
HNHA	sample_1	not available	Ex-cond_1

Software:

UXNMR -

NMR spectrometers:

Bruker Avance 600 MHz
Bruker Avance 800 MHz

BMRB	1672 4767
PDB	1APC 1LM3 1M6T 1QPU 1QQ3 256B 2BC5 3U8P 4EA3 4EIY 4IAQ 4IAR 4IB4 4JKV 4L6R 4N4W 4N6H 4NC3 4NTJ 4O9R 4OR2 4PXZ 4PY0 4QIM 4QIN 4RWA 4RWD
DBJ	BAB38636 BAG80065 BAI28542 BAI33713 BAI38842
EMBL	CAA47706 CAP78754 CAQ34585 CAQ91733 CAR01210
GB	AAA97133 AAB20782 AAG59433 AAN45672 AAN83756
PIR	E86121 E91280
REF	NP_290867 NP_313240 NP_709965 NP_757182 WP_000112424
SP	P0ABE7 P0ABE8 Q8CVG7
AlphaFold	P0ABE7 P0ABE8 Q8CVG7