BMRB Entry 4142

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4142

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H Chemical Shift Assignments of the Complex between Palmitate and a Non-Specific Lipid Transfer Protein (ns-LTP1) Isolated from Barley Seeds

Deposition date:

1998-05-18

Original release date:

1999-03-01

Authors:

Lerche, Mathilde; Poulsen, Flemming

Citation:

Citation: Lerche, Mathilde; Poulsen, Flemming. "Assignments of 1H and 13C Resonances in the Complex of Palmitate and a Non-specific Lipid Transfer Protein (ns-LTP) Isolated from Barley Seeds." J. Biomol. NMR 12, 571-572 (1998).

Assembly members:

Assembly members:
LTP, polymer, 91 residues, 9694 Da.
PLM, non-polymer, 256.424 Da.

Natural source:

Natural source: Common Name: barley Taxonomy ID: 4513 Superkingdom: EuKaryota Kingdom: Viridiplantae Genus/species: Hordeum vulgare

Experimental source:

Experimental source: Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
LTP: LNCGQVDSKMKPCLTYVQGG PGPSGECCNGVRDLHNQAQS SGDRQTVCNCLKGIARGIHN LNLNNAASIPSKCNVNVPYT ISPDIDCSRIY

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_one
- assigned_chemical_shifts_two

Data type	Count
13C chemical shifts	7
1H chemical shifts	595

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ns-LTP1	1
2	Palmitic acid	2

Entities:

Entity 1, ns-LTP1 91 residues - 9694 Da.

1

LEU

ASN

CYS

GLY

GLN

VAL

ASP

SER

LYS

MET

2

LYS

PRO

CYS

LEU

THR

TYR

VAL

GLN

GLY

3

PRO

GLY

PRO

SER

GLY

GLU

CYS

ASN

GLY

4

VAL

ARG

ASP

LEU

HIS

ASN

GLN

ALA

GLN

SER

5

SER

GLY

ASP

ARG

GLN

THR

VAL

CYS

ASN

CYS

6

LEU

LYS

GLY

ILE

ALA

ARG

GLY

ILE

HIS

ASN

7

LEU

ASN

LEU

ASN

ALA

SER

ILE

PRO

8

SER

LYS

CYS

ASN

VAL

ASN

VAL

PRO

TYR

THR

9

ILE

SER

PRO

ASP

ILE

ASP

CYS

SER

ARG

ILE

10

TYR

Entity 2, Palmitic acid - C16 H32 O2 - 256.424 Da.

1

PLM

Samples:

sample_one: LTP 2.1 mM; H2O 90%; D2O 10%

sample_conditions_one: pH: 7.2 na; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_conditions_one

Software:

PRONTO v970801, Carlsberg A/S - assignments

BMRB	15143
PDB	1BE2 1JTB 1LIP 1MID 3GSH
DBJ	BAK05317
EMBL	CAA28805 CAA41946 CAA42832 CAP16136
GB	AAA32970
SP	P07597
AlphaFold	P07597