BMRB Entry 19576

Name: Backbone resonance assignment of FAPP1 PH domain in the presence of 10% (w/v) DMPC/DHPC (q=0.25), and in the presence of 10% (w/v) DMPC/DHPC (q=0.25) plus 8mM PI4P
Published: 2014-02-11

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19576

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone resonance assignment of FAPP1 PH domain in the presence of 10% (w/v) DMPC/DHPC (q=0.25), and in the presence of 10% (w/v) DMPC/DHPC (q=0.25) plus 8mM PI4P

Deposition date:

2013-10-23

Original release date:

2014-02-11

Authors:

Prestegard, James; Liu, Yizhou

Citation:

Citation: Liu, Yizhou; Kahn, Richard; Prestegard, James. "Interaction of Fapp1 with Arf1 and PI4P at a membrane surface: an example of coincidence detection." Structure 22, 421-430 (2014).
PubMed: 24462251

Assembly members:

Assembly members:
FAPP1, polymer, 106 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET20(b)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
FAPP1: MEGVLYKWTNYLTGWQPRWF VLDNGILSYYDSQDDVCKGS KGSIKMAVCEIKVHSADNTR MELIIPGEQHFYMKAVNAAE RQRWLVALGSSKACLTDTLE HHHHHH

Data sets:

assigned_chemical_shifts
- FAPP1_with_DMPC-DHPC
- FAPP1_with_DMPC-DHPC_and_PI4P

Data type	Count
13C chemical shifts	449
15N chemical shifts	191
1H chemical shifts	191

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FAPP1 PH domain	1

Entities:

Entity 1, FAPP1 PH domain 106 residues - Formula weight is not available

1

MET

GLU

GLY

VAL

LEU

TYR

LYS

TRP

THR

ASN

2

TYR

LEU

THR

GLY

TRP

GLN

PRO

ARG

TRP

PHE

3

VAL

LEU

ASP

ASN

GLY

ILE

LEU

SER

TYR

4

ASP

SER

GLN

ASP

VAL

CYS

LYS

GLY

SER

5

LYS

GLY

SER

ILE

LYS

MET

ALA

VAL

CYS

GLU

6

ILE

LYS

VAL

HIS

SER

ALA

ASP

ASN

THR

ARG

7

MET

GLU

LEU

ILE

PRO

GLY

GLU

GLN

HIS

8

PHE

TYR

MET

LYS

ALA

VAL

ASN

ALA

GLU

9

ARG

GLN

ARG

TRP

LEU

VAL

ALA

LEU

GLY

SER

10

SER

LYS

ALA

CYS

LEU

THR

ASP

THR

LEU

GLU

11

HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_2	isotropic	sample_conditions_1
3D HNCACB	sample_2	isotropic	sample_conditions_1

BMRB	16082 19508
PDB	2KCJ 2MDX
DBJ	BAG37067
GB	AAG15199 AAG15200 AAH31110 AAH44567 AAH83759
REF	NP_001013095 NP_001095383 NP_001230393 NP_061964 NP_112546
SP	Q9ERS4 Q9HB20
TPG	DAA32821
AlphaFold	Q9ERS4 Q9HB20

BMRB Entry 19576

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: