BMRB Entry 15583

Title:
Solution structure of N-terminal Fowlicidin-1 in the presence of LPS
Deposition date:
2007-12-06
Original release date:
2008-10-31
Authors:
Bhunia, Anirban; Bhattacharjya, Surajit
Citation:

Citation: Bhunia, Anirban; Mohanram, Harini; Bhattacharjya, Surajit. "Lipopolysaccharide bound structures of the active fragments of fowlicidin-1, a cathelicidin family of antimicrobial and antiendotoxic peptide from chicken, determined by transferred nuclear overhauser effect spectroscopy"  Biopolymers 92, 9-22 (2009).
PubMed: 18844294

Assembly members:

Assembly members:
RG16, polymer, 16 residues, 1868.359 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: Standard F-moc solid phase peptide synthesised   Host organism: Solid phase peptide synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
RG16: RVKRVWPLVIRTVIAG

Data sets:
Data typeCount
1H chemical shifts101

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1RG161

Entities:

Entity 1, RG16 16 residues - 1868.359 Da.

1   ARGVALLYSARGVALTRPPROLEUVALILE
2   ARGTHRVALILEALAGLY

Samples:

sample_1: RG16 0.5 mM

sample_conditions_1: pH: 4.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H trNOESYsample_1isotropicsample_conditions_1

Software:

DYANA v1.5, Guntert, Braun and Wuthrich - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz

Related Database Links:

BMRB 15978 21013
PDB
DBJ BAF75952
GB AAS99323 AAZ42399 AAZ65841 ACR22842 ADZ99028
REF NP_001001605
SP Q6QLQ5
AlphaFold Q6QLQ5