BMRB Entry 5660
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PDB ID: 1akk
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5660
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Sivakolundu, Sivashankar; Mabrouk, Patricia. "Insights into the Alkaline Transformation of Ferricyt c from 1H NMR Study in 30%
Acetonitrile-Water" Protein Sci. 10, 2291-2300 (2001).
Assembly members:
oxidized cytochrome c, polymer, 104 residues, 12384 Da.
HEM, non-polymer, 616.487 Da.
Natural source: Common Name: Horse Taxonomy ID: 9796 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Equus caballus
Experimental source: Production method: vendor
Entity Sequences (FASTA):
oxidized cytochrome c: GDVEKGKKIFVQKCAQCHTV
EKGGKHKTGPNLHGLFGRKT
GQAPGFTYTDANKNKGITWK
EETLMEYLENPKKYIPGTKM
IFAGIKKKTEREDLIAYLKK
ATNE
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 39 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | cytochrome c | 1 |
| 2 | HEME C | 2 |
Entities:
Entity 1, cytochrome c 104 residues - 12384 Da.
| 1 | GLY | ASP | VAL | GLU | LYS | GLY | LYS | LYS | ILE | PHE | ||||
| 2 | VAL | GLN | LYS | CYS | ALA | GLN | CYS | HIS | THR | VAL | ||||
| 3 | GLU | LYS | GLY | GLY | LYS | HIS | LYS | THR | GLY | PRO | ||||
| 4 | ASN | LEU | HIS | GLY | LEU | PHE | GLY | ARG | LYS | THR | ||||
| 5 | GLY | GLN | ALA | PRO | GLY | PHE | THR | TYR | THR | ASP | ||||
| 6 | ALA | ASN | LYS | ASN | LYS | GLY | ILE | THR | TRP | LYS | ||||
| 7 | GLU | GLU | THR | LEU | MET | GLU | TYR | LEU | GLU | ASN | ||||
| 8 | PRO | LYS | LYS | TYR | ILE | PRO | GLY | THR | LYS | MET | ||||
| 9 | ILE | PHE | ALA | GLY | ILE | LYS | LYS | LYS | THR | GLU | ||||
| 10 | ARG | GLU | ASP | LEU | ILE | ALA | TYR | LEU | LYS | LYS | ||||
| 11 | ALA | THR | ASN | GLU |
Entity 2, HEME C - C34 H32 Fe N4 O4 - 616.487 Da.
| 1 | HEM |
Related Database Links:
| SWISS-PROT | P68097 P68096 P00004 |
| REF | XP_001498872 |
| PRF | 610169A |
| GenBank | AAB33495 |
| PDB | 2PCB 2GIW 2FRC 1WEJ 1U75 1OCD 1M60 1LC2 1LC1 1I5T 1HRC 1GIW 1FI9 1FI7 1CRC 1AKK |
| BMRB | 948 947 946 944 673 672 665 645 630 5830 5829 5828 5827 546 545 544 543 5372 5026 499 4810 4809 4808 4805 439 438 437 436 4189 336 317 316 286 285 274 244 243 2368 2367 2366 224 220 216 1789 1787 1785 1783 1736 1404 1171 1170 1116 1114 1113 1112 1111 1110 1109 1108 1107 1058 |