BMRB Entry 5297

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PDB ID: 1l2m
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5297
MolProbity Validation Chart

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Title:
1H, 13C, and 15N assignment of the N-terminal, DNA-binding domain of the replication initiation protein from a geminivirus
Deposition date:
2002-02-19
Original release date:
2002-09-11
Authors:
Campos-Olivas, Ramon; Louis, John; Clerot, J.; Gronenborn, Bruno; Gronenborn, Angela
Citation:

Citation: Campos-Olivas, Ramon; Louis, John; Clerot, J.; Gronenborn, Bruno; Gronenborn, Angela. "The Structure of a Replication Initiator unites Diverse aspects of Nucleic Acid Metabolism"  Proc. Natl. Acad. Sci. U.S.A. 99, 10310-10315 (2002).
PubMed: 12130667

Assembly members:

Assembly members:
N-terminal DNA-binding domain of Rep protein from a geminivirus, polymer, 118 residues, 13563.3 Da.

Natural source:

Natural source:   Common Name: Tomato yellow leaf curl virus - Sardinia   Taxonomy ID: 123735   Superkingdom: Viruses   Kingdom: not available   Genus/species: Begomovirus Tomato yellow leaf curl virus - Sardinia

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
N-terminal DNA-binding domain of Rep protein from a geminivirus: SGRFSIKAKNYFLTYPKCDL TKENALSQITNLQTPTNKLF IKICRELHENGEPHLHILIQ FEGKYNCTNQRFFDLVSPTR SAHFHPNIQGAKSSSDVKSY IDKDGDVLEWGTFQIDGR

Data sets:
Data typeCount
1H chemical shifts769
13C chemical shifts518
15N chemical shifts132
coupling constants84

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1NTD-Rep, rep4-1211

Entities:

Entity 1, NTD-Rep, rep4-121 118 residues - 13563.3 Da.

1   SERGLYARGPHESERILELYSALALYSASN
2   TYRPHELEUTHRTYRPROLYSCYSASPLEU
3   THRLYSGLUASNALALEUSERGLNILETHR
4   ASNLEUGLNTHRPROTHRASNLYSLEUPHE
5   ILELYSILECYSARGGLULEUHISGLUASN
6   GLYGLUPROHISLEUHISILELEUILEGLN
7   PHEGLUGLYLYSTYRASNCYSTHRASNGLN
8   ARGPHEPHEASPLEUVALSERPROTHRARG
9   SERALAHISPHEHISPROASNILEGLNGLY
10   ALALYSSERSERSERASPVALLYSSERTYR
11   ILEASPLYSASPGLYASPVALLEUGLUTRP
12   GLYTHRPHEGLNILEASPGLYARG

Related Database Links:

BMRB 5341
PDB 1L2M 1L5I
EMBL CAA43466
GB ABC71734 ABC71737 ABC71739 ABC71740 ABC71742
REF NP_620741
SP P27260
AlphaFold P27260 P27260

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