BMRB Entry 18307

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18307

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Title:
Human APOBEC2 chemical shifts
Deposition date:
2012-03-01
Original release date:
2012-03-28
Authors:
Krzysiak, Troy; Jung, Jinwon; Thompson, James; Baker, David; Gronenborn, Angela
Citation:

Citation: Krzysiak, Troy; Jung, Jinwon; Thompson, James; Baker, David; Gronenborn, Angela. "APOBEC2 is a Monomer in Solution: Implications for APOBEC3G Models"  Biochemistry 51, 2008-2017 (2012).
PubMed: 22339232

Assembly members:

Assembly members:
APOBEC2_1-224, polymer, 227 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET41a modified

Entity Sequences (FASTA):

Entity Sequences (FASTA):
APOBEC2_1-224: SEFMAQKEEAAVATEAASQN GEDLENLDDPEKLKELIELP PFEIVTGERLPANFFKFQFR NVEYSSGRNKTFLCYVVEAQ GKGGQVQASRGYLEDEHAAA HAEEAFFNTILPAFDPALRY NVTWYVSSSPCAACADRIIK TLSKTKNLRLLILVGRLFMW EEPEIQAALKKLKEAGCKLR IMKPQDFEYVWQNFVEQEEG ESKAFQPWEDIQENFLYYEE KLADILK

Data sets:
Data typeCount
13C chemical shifts387
15N chemical shifts198
1H chemical shifts198

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1A2POBEC2 1-2241

Entities:

Entity 1, A2POBEC2 1-224 227 residues - Formula weight is not available

Start SEF are cloning artifacts

1   SERGLUPHEMETALAGLNLYSGLUGLUALA
2   ALAVALALATHRGLUALAALASERGLNASN
3   GLYGLUASPLEUGLUASNLEUASPASPPRO
4   GLULYSLEULYSGLULEUILEGLULEUPRO
5   PROPHEGLUILEVALTHRGLYGLUARGLEU
6   PROALAASNPHEPHELYSPHEGLNPHEARG
7   ASNVALGLUTYRSERSERGLYARGASNLYS
8   THRPHELEUCYSTYRVALVALGLUALAGLN
9   GLYLYSGLYGLYGLNVALGLNALASERARG
10   GLYTYRLEUGLUASPGLUHISALAALAALA
11   HISALAGLUGLUALAPHEPHEASNTHRILE
12   LEUPROALAPHEASPPROALALEUARGTYR
13   ASNVALTHRTRPTYRVALSERSERSERPRO
14   CYSALAALACYSALAASPARGILEILELYS
15   THRLEUSERLYSTHRLYSASNLEUARGLEU
16   LEUILELEUVALGLYARGLEUPHEMETTRP
17   GLUGLUPROGLUILEGLNALAALALEULYS
18   LYSLEULYSGLUALAGLYCYSLYSLEUARG
19   ILEMETLYSPROGLNASPPHEGLUTYRVAL
20   TRPGLNASNPHEVALGLUGLNGLUGLUGLY
21   GLUSERLYSALAPHEGLNPROTRPGLUASP
22   ILEGLNGLUASNPHELEUTYRTYRGLUGLU
23   LYSLEUALAASPILELEULYS

Related Database Links:

BMRB 18306
PDB 2NYT
DBJ BAD97181 BAG36096
EMBL CAH90732
GB AAD45360 AAH47767 AAH69688 AAH69764 AAT44388
REF NP_001125408 NP_006780 XP_001117195 XP_003266357 XP_003897628
SP Q694B4 Q9Y235
AlphaFold Q694B4 Q9Y235

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks