data_6vhc_residue ############################ # Computer software used # ############################ save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 6vhc _Structure_validation_residue.Date_analyzed 2020-02-14 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' GLY . . . . . . . . . . . . . . . . . . . . 0 CA--C 1.545 1.944 0 N-CA-C 109.341 -1.504 . . . . 5.81 109.341 . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' SER . . . . . . . . . . . . . 38.5 m -99.03 152.56 19.69 Favored 'General case' 0 C--O 1.251 1.156 0 O-C-N 126.889 2.17 . . . . 10.36 112.24 -174.205 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' ASN . . . . . . . . . . . . . 21.3 m-80 -131.39 138.26 49.04 Favored 'General case' 0 N--CA 1.473 0.718 0 O-C-N 118.89 -2.381 . . . . 13.01 110.892 -174.294 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' GLN . . . . . . . . . . . . . 46.1 tt0 -129.0 133.55 47.8 Favored 'General case' 0 C--O 1.256 1.418 0 O-C-N 120.122 -1.612 . . . . 8.5 110.259 171.047 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' ASN . . . . . . . . . . . . . 72.5 m-80 -111.66 122.21 47.19 Favored 'General case' 0 C--N 1.322 -0.608 0 O-C-N 119.529 -1.982 . . . . 7.88 108.895 169.615 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 19.3 m120 -113.23 95.31 5.31 Favored 'General case' 0 C--N 1.327 -0.378 0 N-CA-C 108.059 -1.089 . . . . 6.82 108.059 174.5 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 7' ' ' PHE . . . . . . . . . . . . . 96.9 m-85 . . . . . 0 C--O 1.267 1.985 0 O-C-N 119.463 -2.023 . . . . 9.97 111.452 174.467 . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 101' ' ' ' ZN' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 102' ' ' ACT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 201' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 1' ' ' GLY . . . . . . . . . . . . . . . . . . . . 0 CA--C 1.545 1.944 0 N-CA-C 109.341 -1.504 . . . . 5.81 109.341 . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 2' ' ' SER . . . . . . . . . . . . . 38.5 m -99.03 152.56 19.69 Favored 'General case' 0 C--O 1.251 1.156 0 O-C-N 126.889 2.17 . . . . 10.36 112.24 -174.205 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 3' ' ' ASN . . . . . . . . . . . . . 21.3 m-80 -131.39 138.26 49.04 Favored 'General case' 0 N--CA 1.473 0.718 0 O-C-N 118.89 -2.381 . . . . 13.01 110.892 -174.294 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 4' ' ' GLN . . . . . . . . . . . . . 46.1 tt0 -129.0 133.55 47.8 Favored 'General case' 0 C--O 1.256 1.418 0 O-C-N 120.122 -1.612 . . . . 8.5 110.259 171.047 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 5' ' ' ASN . . . . . . . . . . . . . 72.5 m-80 -111.66 122.21 47.19 Favored 'General case' 0 C--N 1.322 -0.608 0 O-C-N 119.529 -1.982 . . . . 7.88 108.895 169.615 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 32.0 m-80 -113.23 95.31 5.31 Favored 'General case' 0 C--N 1.327 -0.378 0 N-CA-C 108.059 -1.089 . . . . 6.82 108.059 174.5 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 7' ' ' PHE . . . . . . . . . . . . . 96.9 m-85 . . . . . 0 C--O 1.267 1.985 0 O-C-N 119.463 -2.023 . . . . 9.97 111.452 174.467 . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 101' ' ' ' ZN' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 102' ' ' ACT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 201' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' GLY . . . . . . . . . . . . . . . . . . . . 0 CA--C 1.545 1.944 0 N-CA-C 109.341 -1.504 . . . . 5.81 109.341 . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' SER . . . . . . . . . . . . . 38.5 m -99.03 152.56 19.69 Favored 'General case' 0 C--O 1.251 1.156 0 O-C-N 126.889 2.17 . . . . 10.36 112.24 -174.205 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' ASN . . . . . . . . . . . . . 21.3 m-80 -131.39 138.26 49.04 Favored 'General case' 0 N--CA 1.473 0.718 0 O-C-N 118.89 -2.381 . . . . 13.01 110.892 -174.294 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' GLN . . . . . . . . . . . . . 46.1 tt0 -129.0 133.55 47.8 Favored 'General case' 0 C--O 1.256 1.418 0 O-C-N 120.122 -1.612 . . . . 8.5 110.259 171.047 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' ASN . . . . . . . . . . . . . 72.5 m-80 -111.66 122.21 47.19 Favored 'General case' 0 C--N 1.322 -0.608 0 O-C-N 119.529 -1.982 . . . . 7.88 108.895 169.615 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 19.3 m120 -113.23 95.31 5.31 Favored 'General case' 0 C--N 1.327 -0.378 0 N-CA-C 108.059 -1.089 . . . . 6.82 108.059 174.5 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 7' ' ' PHE . . . . . . . . . . . . . 96.9 m-85 . . . . . 0 C--O 1.267 1.985 0 O-C-N 119.463 -2.023 . . . . 9.97 111.452 174.467 . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 101' ' ' ' ZN' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 102' ' ' ACT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 201' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 stop_ save_