data_1nyb_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 1nyb _Structure_validation_oneline.Date_analyzed 2016-10-06 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 002 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 003 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 004 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 005 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 006 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 007 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 008 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 009 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 010 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 011 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 012 nuclear orig core . protein 0.00 0.00 0 11 1 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 1.33 0 0 0 0 . 1 . 013 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 014 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 015 nuclear orig core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 001 nuclear orig full . protein,rna 0.87 0.87 1 21 1 17 1 1 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.90 1 24 2 24 . 1 . 002 nuclear orig full . protein,rna 0.00 0.00 0 21 1 17 1 0 19 20 0 398 0.00 0.00 7 631 1.11 15.22 1.43 2 24 4 24 . 1 . 003 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 2 18 20 0 398 0.00 0.00 3 631 0.48 6.52 1.05 2 24 4 24 . 1 . 004 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 0.85 4 24 5 24 . 1 . 005 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 5 631 0.79 10.87 0.50 1 24 3 24 . 1 . 006 nuclear orig full . protein,rna 0.87 0.87 0 21 0 17 0 1 19 20 0 398 0.00 0.00 10 631 1.58 13.04 1.11 3 24 3 24 . 1 . 007 nuclear orig full . protein,rna 0.00 0.00 1 21 1 17 0 2 18 20 0 398 0.00 0.00 8 631 1.27 17.39 1.63 2 24 4 24 . 1 . 008 nuclear orig full . protein,rna 0.87 0.87 0 21 1 17 0 0 20 20 0 398 0.00 0.00 4 631 0.63 8.70 1.35 2 24 3 24 . 1 . 009 nuclear orig full . protein,rna 0.00 0.00 0 21 2 17 0 0 20 20 0 398 0.00 0.00 7 631 1.11 13.04 1.31 4 24 6 24 . 1 . 010 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 1 19 20 0 398 0.00 0.00 7 631 1.11 13.04 0.85 2 24 4 24 . 1 . 011 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 6 631 0.95 13.04 0.50 3 24 5 24 . 1 . 012 nuclear orig full . protein,rna 0.00 0.00 0 21 1 17 0 0 20 20 0 398 0.00 0.00 3 631 0.48 6.52 1.08 2 24 5 24 . 1 . 013 nuclear orig full . protein,rna 0.00 0.00 0 21 1 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 1.43 2 24 6 24 . 1 . 014 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 1 19 20 0 398 0.00 0.00 6 631 0.95 13.04 0.85 1 24 3 24 . 1 . 015 nuclear orig full . protein,rna 0.00 0.00 0 21 0 17 0 2 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.05 3 24 5 24 . 1 . 001 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 002 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 003 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 004 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 005 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 006 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 007 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 008 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 009 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 010 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 011 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 012 nuclear build core . protein 0.00 0.00 0 11 1 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 1.33 0 0 0 0 . 1 . 013 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 014 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 015 nuclear build core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 001 nuclear build full . protein,rna 0.00 0.00 1 21 1 17 1 1 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.63 1 24 2 24 . 1 . 002 nuclear build full . protein,rna 0.00 0.00 0 21 1 17 1 0 19 20 0 398 0.00 0.00 7 631 1.11 15.22 1.43 2 24 4 24 . 1 . 003 nuclear build full . protein,rna 0.88 0.88 0 21 0 17 0 2 18 20 0 398 0.00 0.00 3 631 0.48 6.52 1.32 2 24 4 24 . 1 . 004 nuclear build full . protein,rna 0.00 0.00 0 21 0 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 0.85 4 24 5 24 . 1 . 005 nuclear build full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 5 631 0.79 10.87 0.50 1 24 3 24 . 1 . 006 nuclear build full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 10 631 1.58 13.04 1.12 3 24 3 24 . 1 . 007 nuclear build full . protein,rna 0.88 0.88 1 21 1 17 0 2 18 20 0 398 0.00 0.00 8 631 1.27 17.39 1.90 2 24 4 24 . 1 . 008 nuclear build full . protein,rna 0.88 0.88 0 21 1 17 0 0 20 20 0 398 0.00 0.00 4 631 0.63 8.70 1.35 2 24 3 24 . 1 . 009 nuclear build full . protein,rna 0.00 0.00 0 21 2 17 0 0 20 20 0 398 0.00 0.00 7 631 1.11 13.04 1.31 4 24 6 24 . 1 . 010 nuclear build full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 7 631 1.11 13.04 1.12 2 24 4 24 . 1 . 011 nuclear build full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 6 631 0.95 13.04 0.50 3 24 5 24 . 1 . 012 nuclear build full . protein,rna 0.00 0.00 0 21 1 17 0 0 20 20 0 398 0.00 0.00 3 631 0.48 6.52 1.08 2 24 5 24 . 1 . 013 nuclear build full . protein,rna 0.88 0.88 0 21 1 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 1.70 2 24 6 24 . 1 . 014 nuclear build full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 6 631 0.95 13.04 1.12 1 24 3 24 . 1 . 015 nuclear build full . protein,rna 0.88 0.88 0 21 0 17 0 2 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.32 3 24 5 24 . 1 . 001 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 011 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 012 nuclear nobuild core . protein 0.00 0.00 0 11 1 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 1.33 0 0 0 0 . 1 . 013 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 014 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 015 nuclear nobuild core . protein 0.00 0.00 0 11 0 8 0 0 9 9 0 43 0.00 0.00 0 52 0.00 0.00 0.50 0 0 0 0 . 1 . 001 nuclear nobuild full . protein,rna 0.00 0.00 1 21 1 17 1 1 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.63 1 24 2 24 . 1 . 002 nuclear nobuild full . protein,rna 0.00 0.00 0 21 1 17 1 0 19 20 0 398 0.00 0.00 7 631 1.11 15.22 1.43 2 24 4 24 . 1 . 003 nuclear nobuild full . protein,rna 0.88 0.88 0 21 0 17 0 2 18 20 0 398 0.00 0.00 3 631 0.48 6.52 1.32 2 24 4 24 . 1 . 004 nuclear nobuild full . protein,rna 0.00 0.00 0 21 0 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 0.85 4 24 5 24 . 1 . 005 nuclear nobuild full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 5 631 0.79 10.87 0.50 1 24 3 24 . 1 . 006 nuclear nobuild full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 10 631 1.58 13.04 1.12 3 24 3 24 . 1 . 007 nuclear nobuild full . protein,rna 0.88 0.88 1 21 1 17 0 2 18 20 0 398 0.00 0.00 8 631 1.27 17.39 1.90 2 24 4 24 . 1 . 008 nuclear nobuild full . protein,rna 0.88 0.88 0 21 1 17 0 0 20 20 0 398 0.00 0.00 4 631 0.63 8.70 1.35 2 24 3 24 . 1 . 009 nuclear nobuild full . protein,rna 0.00 0.00 0 21 2 17 0 0 20 20 0 398 0.00 0.00 7 631 1.11 13.04 1.31 4 24 6 24 . 1 . 010 nuclear nobuild full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 7 631 1.11 13.04 1.12 2 24 4 24 . 1 . 011 nuclear nobuild full . protein,rna 0.00 0.00 0 21 0 17 0 0 20 20 0 398 0.00 0.00 6 631 0.95 13.04 0.50 3 24 5 24 . 1 . 012 nuclear nobuild full . protein,rna 0.00 0.00 0 21 1 17 0 0 20 20 0 398 0.00 0.00 3 631 0.48 6.52 1.08 2 24 5 24 . 1 . 013 nuclear nobuild full . protein,rna 0.88 0.88 0 21 1 17 0 1 19 20 0 398 0.00 0.00 9 631 1.43 19.57 1.70 2 24 6 24 . 1 . 014 nuclear nobuild full . protein,rna 0.88 0.88 0 21 0 17 0 1 19 20 0 398 0.00 0.00 6 631 0.95 13.04 1.12 1 24 3 24 . 1 . 015 nuclear nobuild full . protein,rna 0.88 0.88 0 21 0 17 0 2 18 20 0 398 0.00 0.00 13 631 2.06 21.74 1.32 3 24 5 24 . 1 stop_ save_