data_2msd_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 2msd _Structure_validation_oneline.Date_analyzed 2016-10-08 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 1.30 1.30 0 536 48 493 2 20 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.88 0 0 0 0 . 1 . 002 nuclear orig core . protein 1.08 1.08 0 536 53 493 1 14 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.73 0 0 0 0 . 1 . 003 nuclear orig core . protein 0.43 0.43 0 536 46 493 2 15 538 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.57 0 0 0 0 . 1 . 004 nuclear orig core . protein 0.86 0.86 1 536 41 493 1 20 534 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.72 0 0 0 0 . 1 . 005 nuclear orig core . protein 0.86 0.86 1 536 52 493 1 21 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.81 0 0 0 0 . 1 . 006 nuclear orig core . protein 2.16 2.16 0 536 47 493 1 12 542 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.81 0 0 0 0 . 1 . 007 nuclear orig core . protein 0.86 0.86 0 536 53 493 4 15 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.77 0 0 0 0 . 1 . 008 nuclear orig core . protein 0.43 0.43 0 536 46 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.61 0 0 0 0 . 1 . 009 nuclear orig core . protein 0.65 0.65 0 536 47 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.68 0 0 0 0 . 1 . 010 nuclear orig core . protein 0.86 0.86 0 536 50 493 3 12 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 1.66 0 0 0 0 . 1 . 001 nuclear orig full . protein 1.09 1.09 0 555 53 512 2 23 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.89 0 0 0 0 . 1 . 002 nuclear orig full . protein 1.09 1.09 0 555 58 512 1 18 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.82 0 0 0 0 . 1 . 003 nuclear orig full . protein 0.33 0.33 0 555 50 512 2 19 554 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.62 0 0 0 0 . 1 . 004 nuclear orig full . protein 1.09 1.09 1 555 43 512 2 25 548 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.84 0 0 0 0 . 1 . 005 nuclear orig full . protein 0.88 0.88 1 555 54 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.82 0 0 0 0 . 1 . 006 nuclear orig full . protein 1.09 1.09 0 555 51 512 2 14 559 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.72 0 0 0 0 . 1 . 007 nuclear orig full . protein 0.77 0.77 0 555 58 512 6 19 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.85 0 0 0 0 . 1 . 008 nuclear orig full . protein 0.55 0.55 0 555 50 512 2 22 551 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.73 0 0 0 0 . 1 . 009 nuclear orig full . protein 0.33 0.33 0 555 51 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.65 0 0 0 0 . 1 . 010 nuclear orig full . protein 0.55 0.55 0 555 54 512 3 16 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 1.67 0 0 0 0 . 1 . 001 nuclear build core . protein 17.78 17.78 0 536 48 493 2 20 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.77 0 0 0 0 . 1 . 002 nuclear build core . protein 16.68 16.68 0 536 52 493 1 14 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.63 0 0 0 0 . 1 . 003 nuclear build core . protein 17.34 17.34 0 536 45 493 2 15 538 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.65 0 0 0 0 . 1 . 004 nuclear build core . protein 17.01 17.01 1 536 40 493 1 20 534 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.68 0 0 0 0 . 1 . 005 nuclear build core . protein 17.01 17.01 1 536 52 493 1 21 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.78 0 0 0 0 . 1 . 006 nuclear build core . protein 19.54 19.54 0 536 47 493 1 12 542 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.60 0 0 0 0 . 1 . 007 nuclear build core . protein 18.77 18.77 0 536 54 493 4 15 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.78 0 0 0 0 . 1 . 008 nuclear build core . protein 16.90 16.90 0 536 46 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.69 0 0 0 0 . 1 . 009 nuclear build core . protein 16.35 16.35 0 536 47 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.68 0 0 0 0 . 1 . 010 nuclear build core . protein 20.20 20.20 0 536 48 493 3 12 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.68 0 0 0 0 . 1 . 001 nuclear build full . protein 18.36 18.36 0 555 53 512 2 23 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.83 0 0 0 0 . 1 . 002 nuclear build full . protein 18.51 18.51 0 555 58 512 1 18 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.77 0 0 0 0 . 1 . 003 nuclear build full . protein 18.61 18.61 0 555 49 512 2 19 554 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.76 0 0 0 0 . 1 . 004 nuclear build full . protein 18.17 18.17 1 555 42 512 2 25 548 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.78 0 0 0 0 . 1 . 005 nuclear build full . protein 19.19 19.19 1 555 54 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.83 0 0 0 0 . 1 . 006 nuclear build full . protein 18.95 18.95 0 555 51 512 2 14 559 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.68 0 0 0 0 . 1 . 007 nuclear build full . protein 19.69 19.69 0 555 59 512 6 19 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.90 0 0 0 0 . 1 . 008 nuclear build full . protein 18.51 18.51 0 555 50 512 2 22 551 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.81 0 0 0 0 . 1 . 009 nuclear build full . protein 17.73 17.73 0 555 51 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.78 0 0 0 0 . 1 . 010 nuclear build full . protein 21.84 21.84 0 555 52 512 3 16 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.81 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 18.00 18.00 0 536 48 493 2 20 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.78 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 17.01 17.01 0 536 53 493 1 14 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.65 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 17.67 17.67 0 536 46 493 2 15 538 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.66 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 17.34 17.34 1 536 41 493 1 20 534 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.69 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 17.12 17.12 1 536 52 493 1 21 533 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.78 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 19.76 19.76 0 536 47 493 1 12 542 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.61 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 19.32 19.32 0 536 53 493 4 15 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.79 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 16.90 16.90 0 536 46 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.69 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 16.58 16.58 0 536 47 493 1 18 536 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.69 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 20.53 20.53 0 536 50 493 3 12 540 555 0 2241 0.00 0.00 0 2796 0.00 0.00 2.70 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 18.46 18.46 0 555 53 512 2 23 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.84 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 18.56 18.56 0 555 58 512 1 18 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.78 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 18.71 18.71 0 555 50 512 2 19 554 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.76 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 18.32 18.32 1 555 43 512 2 25 548 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.79 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 19.24 19.24 1 555 54 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.83 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 19.05 19.05 0 555 51 512 2 14 559 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.68 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 19.93 19.93 0 555 58 512 6 19 550 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.90 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 18.51 18.51 0 555 50 512 2 22 551 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.81 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 17.82 17.82 0 555 51 512 1 22 552 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.78 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 21.99 21.99 0 555 54 512 3 16 556 575 0 2321 0.00 0.00 0 2896 0.00 0.00 2.82 0 0 0 0 . 1 stop_ save_