data_2ms5_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 2ms5 _Structure_validation_residue.Date_analyzed 2016-10-08 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' S' S ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--OP1 1.601 6.825 1 OP1-P-OP2 106.11 -8.993 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.527 -6.659 3 OP1-P-OP2 107.406 -8.129 . 0.707 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.568 4.908 2 OP1-P-OP2 110.867 -5.822 . 0.822 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 4' ' ' ' C' . . . . . 0.49 " H2'" ' C8 ' ' S' ' 5' ' ' ' A' . . . . . . . . 3 O4'--C4' 1.35 -8.611 2 OP1-P-OP2 111.284 -5.544 . 0.883 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' S' S ' 5' ' ' ' A' . . . . . 0.49 ' C8 ' " H2'" ' S' ' 4' ' ' ' C' . . . . . . . . 3 P--O5' 1.519 -7.391 4 OP1-P-OP2 105.988 -9.075 . 0.117 1L . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' S' S ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.528 -6.618 1 OP1-P-OP2 113.523 -4.051 . 0.516 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 3 P--O5' 1.498 -9.501 3 OP1-P-OP2 109.562 -6.692 . 0.729 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 C4'--C3' 1.466 -5.286 2 C4'-C3'-C2' 98.216 -4.484 . 0.789 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' S' S ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--OP2 1.584 5.8 0 OP1-P-OP2 113.759 -3.894 . 0.809 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.589 6.101 2 OP1-P-OP2 105.991 -9.073 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O5' 1.5 -9.267 1 OP1-P-OP2 111.285 -5.543 . 0.814 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 P--O5' 1.503 -9.039 3 OP1-P-OP2 110.42 -6.12 . 0.761 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' C' . . . . . 0.477 " H2'" ' C8 ' ' A' ' 5' ' ' ' A' . . . . . . . . 4 P--O5' 1.514 -7.932 3 OP1-P-OP2 109.309 -6.861 . 0.825 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' A' . . . . . 0.477 ' C8 ' " H2'" ' A' ' 4' ' ' ' C' . . . . . . . . 2 P--OP1 1.559 4.344 5 O3'-P-O5' 116.938 6.809 . 0.151 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.514 -7.746 2 O3'-P-O5' 114.364 5.455 . 0.624 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 P--OP1 1.539 3.15 2 C5'-C4'-O4' 118.0 6.286 . 0.87 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.546 -5.123 3 C1'-O4'-C4' 116.418 7.576 . 0.846 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.374 -6.575 2 OP1-P-OP2 111.575 -5.35 . 0.851 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--OP1 1.601 6.825 1 OP1-P-OP2 106.11 -8.993 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.527 -6.659 3 OP1-P-OP2 107.406 -8.129 . 0.707 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.568 4.908 2 OP1-P-OP2 110.867 -5.822 . 0.822 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 4' ' ' ' C' . . . . . 0.541 " H2'" ' C8 ' ' S' ' 5' ' ' ' A' . . . . . . . . 3 O4'--C4' 1.35 -8.611 2 OP1-P-OP2 111.284 -5.544 . 0.883 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' S' S ' 5' ' ' ' A' . . . . . 0.541 ' C8 ' " H2'" ' S' ' 4' ' ' ' C' . . . . . . . . 3 P--O5' 1.519 -7.391 4 OP1-P-OP2 105.988 -9.075 . 0.117 1L . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' S' S ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.528 -6.618 1 OP1-P-OP2 113.523 -4.051 . 0.516 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 3 P--O5' 1.498 -9.501 3 OP1-P-OP2 109.562 -6.692 . 0.729 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 C4'--C3' 1.466 -5.286 2 C4'-C3'-C2' 98.216 -4.484 . 0.789 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' S' S ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--OP2 1.584 5.8 0 OP1-P-OP2 113.759 -3.894 . 0.809 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.589 6.101 2 OP1-P-OP2 105.991 -9.073 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O5' 1.5 -9.267 1 OP1-P-OP2 111.285 -5.543 . 0.814 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 P--O5' 1.503 -9.039 3 OP1-P-OP2 110.42 -6.12 . 0.761 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' C' . . . . . 0.677 " H2'" ' C8 ' ' A' ' 5' ' ' ' A' . . . . . . . . 4 P--O5' 1.514 -7.932 3 OP1-P-OP2 109.309 -6.861 . 0.825 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' A' . . . . . 0.677 ' C8 ' " H2'" ' A' ' 4' ' ' ' C' . . . . . . . . 2 P--OP1 1.559 4.344 5 O3'-P-O5' 116.938 6.809 . 0.151 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.514 -7.746 2 O3'-P-O5' 114.364 5.455 . 0.624 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 P--OP1 1.539 3.15 2 C5'-C4'-O4' 118.0 6.286 . 0.87 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.546 -5.123 3 C1'-O4'-C4' 116.418 7.576 . 0.846 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.374 -6.575 2 OP1-P-OP2 111.575 -5.35 . 0.851 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--OP1 1.601 6.825 1 OP1-P-OP2 106.11 -8.993 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.527 -6.659 3 OP1-P-OP2 107.406 -8.129 . 0.707 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.568 4.908 2 OP1-P-OP2 110.867 -5.822 . 0.822 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 4' ' ' ' C' . . . . . 0.541 " H2'" ' C8 ' ' S' ' 5' ' ' ' A' . . . . . . . . 3 O4'--C4' 1.35 -8.611 2 OP1-P-OP2 111.284 -5.544 . 0.883 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' S' S ' 5' ' ' ' A' . . . . . 0.541 ' C8 ' " H2'" ' S' ' 4' ' ' ' C' . . . . . . . . 3 P--O5' 1.519 -7.391 4 OP1-P-OP2 105.988 -9.075 . 0.117 1L . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' S' S ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.528 -6.618 1 OP1-P-OP2 113.523 -4.051 . 0.516 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 3 P--O5' 1.498 -9.501 3 OP1-P-OP2 109.562 -6.692 . 0.729 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 C4'--C3' 1.466 -5.286 2 C4'-C3'-C2' 98.216 -4.484 . 0.789 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' S' S ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--OP2 1.584 5.8 0 OP1-P-OP2 113.759 -3.894 . 0.809 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 1 P--OP2 1.589 6.101 2 OP1-P-OP2 105.991 -9.073 . 0.0 '__' . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 4 P--O5' 1.5 -9.267 1 OP1-P-OP2 111.285 -5.543 . 0.814 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 P--O5' 1.503 -9.039 3 OP1-P-OP2 110.42 -6.12 . 0.761 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' C' . . . . . 0.677 " H2'" ' C8 ' ' A' ' 5' ' ' ' A' . . . . . . . . 4 P--O5' 1.514 -7.932 3 OP1-P-OP2 109.309 -6.861 . 0.825 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' A' . . . . . 0.677 ' C8 ' " H2'" ' A' ' 4' ' ' ' C' . . . . . . . . 2 P--OP1 1.559 4.344 5 O3'-P-O5' 116.938 6.809 . 0.151 1a . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 4 P--O3' 1.514 -7.746 2 O3'-P-O5' 114.364 5.455 . 0.624 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 P--OP1 1.539 3.15 2 C5'-C4'-O4' 118.0 6.286 . 0.87 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 3 P--O3' 1.546 -5.123 3 C1'-O4'-C4' 116.418 7.576 . 0.846 1a . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.374 -6.575 2 OP1-P-OP2 111.575 -5.35 . 0.851 1a . 0.0 . . . . . . . . . . 2 1 . 1 stop_ save_