data_2kdc_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 2kdc _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 24.46 24.46 0 276 12 237 30 36 217 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.19 0 0 0 0 . 1 . 002 nuclear orig core . protein 20.93 20.93 0 276 18 237 33 45 205 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.30 0 0 0 0 . 1 . 003 nuclear orig core . protein 28.65 28.65 0 276 12 237 40 39 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.30 0 0 0 0 . 1 . 004 nuclear orig core . protein 26.00 26.00 0 276 15 237 28 57 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.35 0 0 0 0 . 1 . 005 nuclear orig core . protein 33.49 33.49 0 276 3 237 28 48 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 2.90 0 0 0 0 . 1 . 006 nuclear orig core . protein 28.65 28.65 0 276 18 237 31 48 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.43 0 0 0 0 . 1 . 007 nuclear orig core . protein 28.21 28.21 0 276 12 237 30 58 195 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.32 0 0 0 0 . 1 . 008 nuclear orig core . protein 32.83 32.83 0 276 9 237 35 50 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.28 0 0 0 0 . 1 . 009 nuclear orig core . protein 27.32 27.32 0 276 15 237 28 54 201 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.36 0 0 0 0 . 1 . 010 nuclear orig core . protein 20.49 20.49 0 276 9 237 27 48 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.06 0 0 0 0 . 1 . 011 nuclear orig core . protein 23.58 23.58 0 276 18 237 18 69 196 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.38 0 0 0 0 . 1 . 012 nuclear orig core . protein 31.29 31.29 0 276 9 237 39 45 199 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.26 0 0 0 0 . 1 . 013 nuclear orig core . protein 22.04 22.04 0 276 9 237 36 36 211 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.07 0 0 0 0 . 1 . 014 nuclear orig core . protein 24.90 24.90 0 276 15 237 18 57 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.30 0 0 0 0 . 1 . 015 nuclear orig core . protein 32.39 32.39 0 276 12 237 40 52 191 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.39 0 0 0 0 . 1 . 016 nuclear orig core . protein 28.21 28.21 0 276 27 237 24 52 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.55 0 0 0 0 . 1 . 001 nuclear orig full . protein 22.80 22.80 0 339 12 285 33 45 279 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.08 0 0 0 0 . 1 . 002 nuclear orig full . protein 21.39 21.39 0 339 21 285 36 59 262 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.29 0 0 0 0 . 1 . 003 nuclear orig full . protein 31.46 31.46 0 339 12 285 57 42 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.28 0 0 0 0 . 1 . 004 nuclear orig full . protein 27.57 27.57 0 339 15 285 33 69 255 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.30 0 0 0 0 . 1 . 005 nuclear orig full . protein 32.17 32.17 0 339 3 285 39 54 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 2.81 0 0 0 0 . 1 . 006 nuclear orig full . protein 27.75 27.75 0 339 18 285 42 57 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 007 nuclear orig full . protein 26.33 26.33 0 339 13 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.25 0 0 0 0 . 1 . 008 nuclear orig full . protein 31.46 31.46 0 339 12 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.29 0 0 0 0 . 1 . 009 nuclear orig full . protein 25.27 25.27 0 339 15 285 33 58 266 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.24 0 0 0 0 . 1 . 010 nuclear orig full . protein 19.79 19.79 0 339 15 285 36 57 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.14 0 0 0 0 . 1 . 011 nuclear orig full . protein 24.21 24.21 0 339 21 285 27 80 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.37 0 0 0 0 . 1 . 012 nuclear orig full . protein 28.28 28.28 0 339 15 285 42 65 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.33 0 0 0 0 . 1 . 013 nuclear orig full . protein 18.73 18.73 0 339 9 285 42 39 276 357 0 1449 0.00 0.00 0 1806 0.00 0.00 2.92 0 0 0 0 . 1 . 014 nuclear orig full . protein 20.86 20.86 0 339 15 285 24 60 273 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.14 0 0 0 0 . 1 . 015 nuclear orig full . protein 30.05 30.05 0 339 12 285 51 55 251 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.28 0 0 0 0 . 1 . 016 nuclear orig full . protein 23.68 23.68 0 339 33 285 30 60 267 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.47 0 0 0 0 . 1 . 001 nuclear build core . protein 31.80 31.80 0 276 15 237 30 36 217 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.37 0 0 0 0 . 1 . 002 nuclear build core . protein 29.15 29.15 0 276 18 237 33 45 205 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.44 0 0 0 0 . 1 . 003 nuclear build core . protein 37.09 37.09 0 276 12 237 40 39 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.41 0 0 0 0 . 1 . 004 nuclear build core . protein 46.59 46.59 0 276 15 237 28 57 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.59 0 0 0 0 . 1 . 005 nuclear build core . protein 41.51 41.51 0 276 3 237 28 48 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 2.99 0 0 0 0 . 1 . 006 nuclear build core . protein 39.30 39.30 0 276 15 237 31 48 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.50 0 0 0 0 . 1 . 007 nuclear build core . protein 39.74 39.74 0 276 15 237 30 58 195 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.54 0 0 0 0 . 1 . 008 nuclear build core . protein 38.42 38.42 0 276 9 237 35 50 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.35 0 0 0 0 . 1 . 009 nuclear build core . protein 33.12 33.12 0 276 15 237 28 54 201 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.44 0 0 0 0 . 1 . 010 nuclear build core . protein 34.44 34.44 0 276 9 237 27 48 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.27 0 0 0 0 . 1 . 011 nuclear build core . protein 38.42 38.42 0 276 18 237 18 69 196 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.58 0 0 0 0 . 1 . 012 nuclear build core . protein 40.41 40.41 0 276 9 237 39 45 199 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.36 0 0 0 0 . 1 . 013 nuclear build core . protein 29.15 29.15 0 276 9 237 36 36 211 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.19 0 0 0 0 . 1 . 014 nuclear build core . protein 43.28 43.28 0 276 15 237 18 57 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.53 0 0 0 0 . 1 . 015 nuclear build core . protein 40.63 40.63 0 276 12 237 40 52 191 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.48 0 0 0 0 . 1 . 016 nuclear build core . protein 40.85 40.85 0 276 27 237 24 52 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.70 0 0 0 0 . 1 . 001 nuclear build full . protein 29.19 29.19 0 339 15 285 33 45 279 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.26 0 0 0 0 . 1 . 002 nuclear build full . protein 27.60 27.60 0 339 21 285 36 59 262 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.40 0 0 0 0 . 1 . 003 nuclear build full . protein 38.22 38.22 0 339 12 285 57 42 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 004 nuclear build full . protein 44.41 44.41 0 339 15 285 33 69 255 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.50 0 0 0 0 . 1 . 005 nuclear build full . protein 39.99 39.99 0 339 3 285 39 54 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 2.90 0 0 0 0 . 1 . 006 nuclear build full . protein 35.92 35.92 0 339 15 285 42 57 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.41 0 0 0 0 . 1 . 007 nuclear build full . protein 35.74 35.74 0 339 16 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.44 0 0 0 0 . 1 . 008 nuclear build full . protein 36.80 36.80 0 339 12 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 009 nuclear build full . protein 30.25 30.25 0 339 15 285 33 58 266 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.31 0 0 0 0 . 1 . 010 nuclear build full . protein 31.67 31.67 0 339 15 285 36 57 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.34 0 0 0 0 . 1 . 011 nuclear build full . protein 35.74 35.74 0 339 21 285 27 80 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.53 0 0 0 0 . 1 . 012 nuclear build full . protein 35.74 35.74 0 339 15 285 42 65 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.42 0 0 0 0 . 1 . 013 nuclear build full . protein 25.48 25.48 0 339 9 285 42 39 276 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.04 0 0 0 0 . 1 . 014 nuclear build full . protein 35.74 35.74 0 339 15 285 24 60 273 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 015 nuclear build full . protein 36.98 36.98 0 339 12 285 51 55 251 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 016 nuclear build full . protein 35.39 35.39 0 339 33 285 30 60 267 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.63 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 32.46 32.46 0 276 12 237 30 36 217 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.31 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 29.15 29.15 0 276 18 237 33 45 205 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.44 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 37.09 37.09 0 276 12 237 40 39 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.41 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 46.59 46.59 0 276 15 237 28 57 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.59 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 41.51 41.51 0 276 3 237 28 48 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 2.99 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 41.07 41.07 0 276 18 237 31 48 204 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.58 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 40.19 40.19 0 276 12 237 30 58 195 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.47 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 38.42 38.42 0 276 9 237 35 50 198 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.35 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 34.44 34.44 0 276 15 237 28 54 201 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.46 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 34.44 34.44 0 276 9 237 27 48 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.27 0 0 0 0 . 1 . 011 nuclear nobuild core . protein 38.42 38.42 0 276 18 237 18 69 196 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.58 0 0 0 0 . 1 . 012 nuclear nobuild core . protein 41.07 41.07 0 276 9 237 39 45 199 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.37 0 0 0 0 . 1 . 013 nuclear nobuild core . protein 29.15 29.15 0 276 9 237 36 36 211 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.19 0 0 0 0 . 1 . 014 nuclear nobuild core . protein 43.94 43.94 0 276 15 237 18 57 208 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.54 0 0 0 0 . 1 . 015 nuclear nobuild core . protein 40.63 40.63 0 276 12 237 40 52 191 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.48 0 0 0 0 . 1 . 016 nuclear nobuild core . protein 41.51 41.51 0 276 27 237 24 52 207 283 0 1153 0.00 0.00 0 1436 0.00 0.00 3.71 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 29.72 29.72 0 339 12 285 33 45 279 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.19 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 28.13 28.13 0 339 21 285 36 59 262 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.40 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 38.22 38.22 0 339 12 285 57 42 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 44.94 44.94 0 339 15 285 33 69 255 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.51 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 39.99 39.99 0 339 3 285 39 54 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 2.90 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 37.33 37.33 0 339 18 285 42 57 258 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.48 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 36.09 36.09 0 339 13 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.38 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 36.80 36.80 0 339 12 285 38 67 252 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 31.85 31.85 0 339 15 285 33 58 266 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.33 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 31.67 31.67 0 339 15 285 36 57 264 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.34 0 0 0 0 . 1 . 011 nuclear nobuild full . protein 35.74 35.74 0 339 21 285 27 80 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.53 0 0 0 0 . 1 . 012 nuclear nobuild full . protein 36.27 36.27 0 339 15 285 42 65 250 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.43 0 0 0 0 . 1 . 013 nuclear nobuild full . protein 25.48 25.48 0 339 9 285 42 39 276 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.04 0 0 0 0 . 1 . 014 nuclear nobuild full . protein 36.27 36.27 0 339 15 285 24 60 273 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.37 0 0 0 0 . 1 . 015 nuclear nobuild full . protein 36.98 36.98 0 339 12 285 51 55 251 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.36 0 0 0 0 . 1 . 016 nuclear nobuild full . protein 35.92 35.92 0 339 33 285 30 60 267 357 0 1449 0.00 0.00 0 1806 0.00 0.00 3.64 0 0 0 0 . 1 stop_ save_