data_5jdp_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 5jdp _Structure_validation_oneline.Date_analyzed 2016-10-12 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear build core . protein 30.27 30.27 0 225 9 207 10 19 208 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.05 0 0 0 0 . 1 . 002 nuclear build core . protein 30.01 30.01 2 225 12 207 8 19 210 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.13 0 0 0 0 . 1 . 003 nuclear build core . protein 27.68 27.68 2 225 9 207 11 13 213 237 0 1004 0.00 0.00 1 1241 0.08 0.40 2.97 0 0 0 0 . 1 . 004 nuclear build core . protein 28.72 28.72 1 225 10 207 4 19 214 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.00 0 0 0 0 . 1 . 005 nuclear build core . protein 31.05 31.05 1 225 13 207 11 8 218 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.07 0 0 0 0 . 1 . 006 nuclear build core . protein 24.84 24.84 1 225 11 207 6 19 212 237 1 1004 0.10 0.40 2 1241 0.16 0.40 3.00 0 0 0 0 . 1 . 007 nuclear build core . protein 23.80 23.80 1 225 14 207 9 21 207 237 0 1004 0.00 0.00 1 1241 0.08 0.40 3.11 0 0 0 0 . 1 . 008 nuclear build core . protein 27.43 27.43 1 225 8 207 9 22 206 237 0 1004 0.00 0.00 0 1241 0.00 0.00 2.99 0 0 0 0 . 1 . 009 nuclear build core . protein 29.50 29.50 1 225 12 207 7 19 211 237 0 1004 0.00 0.00 1 1241 0.08 0.40 3.11 0 0 0 0 . 1 . 010 nuclear build core . protein 25.61 25.61 1 225 8 207 10 17 210 237 1 1004 0.10 0.40 0 1241 0.00 0.00 2.93 0 0 0 0 . 1 . 011 nuclear build core . protein 30.79 30.79 0 225 16 207 9 16 212 237 0 1004 0.00 0.00 1 1241 0.08 0.40 3.21 0 0 0 0 . 1 . 012 nuclear build core . protein 32.34 32.34 1 225 15 207 7 20 210 237 0 1004 0.00 0.00 1 1241 0.08 0.40 3.23 0 0 0 0 . 1 . 013 nuclear build core . protein 24.06 24.06 1 225 9 207 4 21 212 237 1 1004 0.10 0.40 0 1241 0.00 0.00 2.92 0 0 0 0 . 1 . 014 nuclear build core . protein 29.75 29.75 1 225 11 207 7 17 213 237 1 1004 0.10 0.40 1 1241 0.08 0.40 3.06 0 0 0 0 . 1 . 015 nuclear build core . protein 30.27 30.27 1 225 12 207 12 17 208 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.15 0 0 0 0 . 1 . 016 nuclear build core . protein 26.65 26.65 1 225 12 207 5 19 213 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.05 0 0 0 0 . 1 . 017 nuclear build core . protein 26.65 26.65 1 225 12 207 5 19 213 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.05 0 0 0 0 . 1 . 018 nuclear build core . protein 30.79 30.79 0 225 14 207 11 14 212 237 0 1004 0.00 0.00 1 1241 0.08 0.40 3.17 0 0 0 0 . 1 . 019 nuclear build core . protein 26.65 26.65 1 225 12 207 9 21 207 237 1 1004 0.10 0.40 1 1241 0.08 0.40 3.11 0 0 0 0 . 1 . 020 nuclear build core . protein 29.50 29.50 1 225 12 207 5 17 215 237 0 1004 0.00 0.00 0 1241 0.00 0.00 3.06 0 0 0 0 . 1 . 001 nuclear build full . protein 31.98 31.98 0 253 12 232 16 25 242 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.18 0 0 0 0 . 1 . 002 nuclear build full . protein 31.75 31.75 2 253 15 232 16 26 241 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.26 0 0 0 0 . 1 . 003 nuclear build full . protein 28.76 28.76 2 253 12 232 19 19 245 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.12 0 0 0 0 . 1 . 004 nuclear build full . protein 32.67 32.67 1 253 13 232 12 28 243 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.21 0 0 0 0 . 1 . 005 nuclear build full . protein 31.75 31.75 1 253 16 232 18 14 251 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.21 0 0 0 0 . 1 . 006 nuclear build full . protein 25.54 25.54 1 253 14 232 13 25 245 283 1 1139 0.09 0.35 2 1422 0.14 0.35 3.12 0 0 0 0 . 1 . 007 nuclear build full . protein 27.84 27.84 1 253 18 232 18 29 236 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.29 0 0 0 0 . 1 . 008 nuclear build full . protein 31.52 31.52 1 253 8 232 16 27 240 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.05 0 0 0 0 . 1 . 009 nuclear build full . protein 29.91 29.91 1 253 15 232 15 24 244 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.21 0 0 0 0 . 1 . 010 nuclear build full . protein 27.15 27.15 1 253 9 232 18 24 241 283 1 1139 0.09 0.35 0 1422 0.00 0.00 3.02 0 0 0 0 . 1 . 011 nuclear build full . protein 31.06 31.06 0 253 18 232 16 25 242 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.30 0 0 0 0 . 1 . 012 nuclear build full . protein 33.82 33.82 1 253 18 232 16 29 238 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.36 0 0 0 0 . 1 . 013 nuclear build full . protein 27.84 27.84 1 253 12 232 11 25 247 283 1 1139 0.09 0.35 0 1422 0.00 0.00 3.09 0 0 0 0 . 1 . 014 nuclear build full . protein 33.82 33.82 1 253 15 232 14 23 246 283 1 1139 0.09 0.35 1 1422 0.07 0.35 3.25 0 0 0 0 . 1 . 015 nuclear build full . protein 34.05 34.05 1 253 15 232 19 22 242 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.28 0 0 0 0 . 1 . 016 nuclear build full . protein 29.22 29.22 1 253 14 232 14 28 241 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.20 0 0 0 0 . 1 . 017 nuclear build full . protein 29.22 29.22 1 253 14 232 14 28 241 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.20 0 0 0 0 . 1 . 018 nuclear build full . protein 31.29 31.29 0 253 17 232 18 21 244 283 0 1139 0.00 0.00 1 1422 0.07 0.35 3.27 0 0 0 0 . 1 . 019 nuclear build full . protein 29.45 29.45 1 253 14 232 17 29 237 283 1 1139 0.09 0.35 1 1422 0.07 0.35 3.23 0 0 0 0 . 1 . 020 nuclear build full . protein 31.29 31.29 1 253 17 232 12 20 251 283 0 1139 0.00 0.00 0 1422 0.00 0.00 3.22 0 0 0 0 . 1 stop_ save_