data_2mnd_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 2mnd _Structure_validation_residue.Date_analyzed 2016-10-08 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.548 4.607 2 O4'-C1'-C2' 98.826 -6.613 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DG' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 3' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.548 4.583 3 O4'-C1'-N19 114.156 7.945 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' DA' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 2' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.435 2 OP1-P-OP2 109.761 -6.559 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.486 2 OP1-P-OP2 109.453 -6.765 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' DG' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.548 4.673 2 P-O3'-C3' 127.618 6.598 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' DC' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.544 4.132 2 OP1-P-OP2 109.629 -6.647 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.549 2 OP1-P-OP2 109.821 -6.519 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.541 3.712 3 OP1-P-OP2 109.866 -6.489 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 9' ' ' ' DC' . . . . . 0.408 ' C2 ' ' C8 ' ' A' ' 10' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.325 2 P-O3'-C3' 130.817 9.264 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 10' ' ' ' DG' . . . . . 0.408 ' C8 ' ' C2 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.545 4.231 3 OP1-P-OP2 109.608 -6.661 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' B' B ' 11' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.456 2 O4'-C1'-N19 113.188 6.735 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' B' B ' 12' ' ' ' DG' . . . . . 0.441 ' C6 ' ' C5 ' ' B' ' 13' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.545 4.256 3 OP1-P-OP2 109.718 -6.588 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' B' B ' 13' ' ' ' DA' . . . . . 0.441 ' C5 ' ' C6 ' ' B' ' 12' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.283 3 OP1-P-OP2 109.867 -6.489 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.359 2 OP1-P-OP2 109.469 -6.754 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' B' B ' 15' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.355 3 O4'-C1'-N19 102.552 -6.56 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.866 2 P-O3'-C3' 127.667 6.639 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 17' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.545 4.303 2 OP1-P-OP2 109.583 -6.678 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' B' B ' 18' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.931 2 OP1-P-OP2 109.967 -6.422 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 19' ' ' ' DC' . . . . . 0.455 ' C4 ' ' C6 ' ' B' ' 20' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.248 2 P-O3'-C3' 127.455 6.463 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' B' B ' 20' ' ' ' DG' . . . . . 0.455 ' C6 ' ' C4 ' ' B' ' 19' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.546 4.371 2 OP1-P-OP2 109.711 -6.592 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' A' A ' 101' ' ' 3BF . . . . . 0.496 ' O12' ' S16' ' A' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 101' ' ' 3BF . . . . . 0.41 ' O12' ' S16' ' B' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.548 4.607 2 O4'-C1'-C2' 98.826 -6.613 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DG' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 3' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.548 4.583 3 O4'-C1'-N19 114.156 7.945 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' DA' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 2' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.435 2 OP1-P-OP2 109.761 -6.559 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.486 2 OP1-P-OP2 109.453 -6.765 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' DG' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.548 4.673 2 P-O3'-C3' 127.618 6.598 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' DC' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.544 4.132 2 OP1-P-OP2 109.629 -6.647 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.549 2 OP1-P-OP2 109.821 -6.519 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.541 3.712 3 OP1-P-OP2 109.866 -6.489 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 9' ' ' ' DC' . . . . . 0.408 ' C2 ' ' C8 ' ' A' ' 10' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.325 2 P-O3'-C3' 130.817 9.264 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 10' ' ' ' DG' . . . . . 0.408 ' C8 ' ' C2 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.545 4.231 3 OP1-P-OP2 109.608 -6.661 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' B' B ' 11' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.456 2 O4'-C1'-N19 113.188 6.735 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' B' B ' 12' ' ' ' DG' . . . . . 0.441 ' C6 ' ' C5 ' ' B' ' 13' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.545 4.256 3 OP1-P-OP2 109.718 -6.588 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' B' B ' 13' ' ' ' DA' . . . . . 0.441 ' C5 ' ' C6 ' ' B' ' 12' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.283 3 OP1-P-OP2 109.867 -6.489 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.359 2 OP1-P-OP2 109.469 -6.754 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' B' B ' 15' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.355 3 O4'-C1'-N19 102.552 -6.56 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.866 2 P-O3'-C3' 127.667 6.639 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 17' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.545 4.303 2 OP1-P-OP2 109.583 -6.678 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' B' B ' 18' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.931 2 OP1-P-OP2 109.967 -6.422 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 19' ' ' ' DC' . . . . . 0.455 ' C4 ' ' C6 ' ' B' ' 20' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.248 2 P-O3'-C3' 127.455 6.463 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' B' B ' 20' ' ' ' DG' . . . . . 0.455 ' C6 ' ' C4 ' ' B' ' 19' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.546 4.371 2 OP1-P-OP2 109.711 -6.592 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 101' ' ' 3BF . . . . . 0.496 ' O12' ' S16' ' A' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 101' ' ' 3BF . . . . . 0.41 ' O12' ' S16' ' B' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.548 4.607 2 O4'-C1'-C2' 98.826 -6.613 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DG' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 3' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.548 4.583 3 O4'-C1'-N19 114.156 7.945 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' DA' . . . . . 0.546 ' C6 ' ' C6 ' ' A' ' 2' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.435 2 OP1-P-OP2 109.761 -6.559 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.486 2 OP1-P-OP2 109.453 -6.765 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' DG' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.548 4.673 2 P-O3'-C3' 127.618 6.598 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' DC' . . . . . 0.447 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.544 4.132 2 OP1-P-OP2 109.629 -6.647 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.549 2 OP1-P-OP2 109.821 -6.519 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.541 3.712 3 OP1-P-OP2 109.866 -6.489 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 9' ' ' ' DC' . . . . . 0.408 ' C2 ' ' C8 ' ' A' ' 10' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.325 2 P-O3'-C3' 130.817 9.264 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 10' ' ' ' DG' . . . . . 0.408 ' C8 ' ' C2 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.545 4.231 3 OP1-P-OP2 109.608 -6.661 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' B' B ' 11' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.547 4.456 2 O4'-C1'-N19 113.188 6.735 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' B' B ' 12' ' ' ' DG' . . . . . 0.441 ' C6 ' ' C5 ' ' B' ' 13' ' ' ' DA' . . . . . . . . 1 C5'--C4' 1.545 4.256 3 OP1-P-OP2 109.718 -6.588 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' B' B ' 13' ' ' ' DA' . . . . . 0.441 ' C5 ' ' C6 ' ' B' ' 12' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.283 3 OP1-P-OP2 109.867 -6.489 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.359 2 OP1-P-OP2 109.469 -6.754 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' B' B ' 15' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.355 3 O4'-C1'-N19 102.552 -6.56 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.866 2 P-O3'-C3' 127.667 6.639 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 17' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.545 4.303 2 OP1-P-OP2 109.583 -6.678 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' B' B ' 18' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.542 3.931 2 OP1-P-OP2 109.967 -6.422 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 19' ' ' ' DC' . . . . . 0.455 ' C4 ' ' C6 ' ' B' ' 20' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.248 2 P-O3'-C3' 127.455 6.463 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' B' B ' 20' ' ' ' DG' . . . . . 0.455 ' C6 ' ' C4 ' ' B' ' 19' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.546 4.371 2 OP1-P-OP2 109.711 -6.592 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 101' ' ' 3BF . . . . . 0.496 ' S16' ' O12' ' A' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 101' ' ' 3BF . . . . . 0.41 ' O12' ' S16' ' B' ' 101' ' ' 3BF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 stop_ save_