data_2kdd_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 2kdd _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 17.33 17.33 0 92 0 84 4 12 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.43 0 0 0 0 . 1 . 002 nuclear orig core . protein 25.03 25.03 0 92 4 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 3.01 0 0 0 0 . 1 . 003 nuclear orig core . protein 14.76 14.76 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.33 0 0 0 0 . 1 . 004 nuclear orig core . protein 15.40 15.40 0 92 4 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.86 0 0 0 0 . 1 . 005 nuclear orig core . protein 16.69 16.69 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.37 0 0 0 0 . 1 . 006 nuclear orig core . protein 21.82 21.82 0 92 0 84 2 14 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.52 0 0 0 0 . 1 . 007 nuclear orig core . protein 25.67 25.67 0 92 0 84 1 13 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.55 0 0 0 0 . 1 . 008 nuclear orig core . protein 15.40 15.40 0 92 0 84 6 8 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.34 0 0 0 0 . 1 . 009 nuclear orig core . protein 17.97 17.97 0 92 2 84 6 10 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.73 0 0 0 0 . 1 . 010 nuclear orig core . protein 21.18 21.18 0 92 2 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 2.72 0 0 0 0 . 1 . 001 nuclear orig full . protein 15.02 15.02 0 106 0 98 4 12 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.33 0 0 0 0 . 1 . 002 nuclear orig full . protein 21.69 21.69 0 106 4 98 2 10 98 110 0 454 0.00 0.00 0 564 0.00 0.00 2.87 0 0 0 0 . 1 . 003 nuclear orig full . protein 13.90 13.90 0 106 0 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.27 0 0 0 0 . 1 . 004 nuclear orig full . protein 13.35 13.35 0 106 4 98 2 16 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.78 0 0 0 0 . 1 . 005 nuclear orig full . protein 14.46 14.46 0 106 0 98 2 14 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.32 0 0 0 0 . 1 . 006 nuclear orig full . protein 18.91 18.91 0 106 0 98 6 14 90 110 0 454 0.00 0.00 0 564 0.00 0.00 2.48 0 0 0 0 . 1 . 007 nuclear orig full . protein 22.25 22.25 0 106 0 98 1 13 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.45 0 0 0 0 . 1 . 008 nuclear orig full . protein 13.35 13.35 0 106 0 98 6 10 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.29 0 0 0 0 . 1 . 009 nuclear orig full . protein 15.57 15.57 0 106 2 98 6 12 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.61 0 0 0 0 . 1 . 010 nuclear orig full . protein 18.35 18.35 0 106 2 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.61 0 0 0 0 . 1 . 001 nuclear build core . protein 19.31 19.31 0 92 0 84 4 12 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.47 0 0 0 0 . 1 . 002 nuclear build core . protein 28.96 28.96 0 92 4 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 3.07 0 0 0 0 . 1 . 003 nuclear build core . protein 22.52 22.52 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.50 0 0 0 0 . 1 . 004 nuclear build core . protein 19.31 19.31 0 92 4 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.95 0 0 0 0 . 1 . 005 nuclear build core . protein 16.09 16.09 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.36 0 0 0 0 . 1 . 006 nuclear build core . protein 24.45 24.45 0 92 0 84 2 14 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.57 0 0 0 0 . 1 . 007 nuclear build core . protein 27.67 27.67 0 92 0 84 1 13 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.58 0 0 0 0 . 1 . 008 nuclear build core . protein 18.02 18.02 0 92 0 84 6 8 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.41 0 0 0 0 . 1 . 009 nuclear build core . protein 20.59 20.59 0 92 2 84 6 10 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.78 0 0 0 0 . 1 . 010 nuclear build core . protein 21.24 21.24 0 92 2 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 2.72 0 0 0 0 . 1 . 001 nuclear build full . protein 16.74 16.74 0 106 0 98 4 12 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.38 0 0 0 0 . 1 . 002 nuclear build full . protein 25.11 25.11 0 106 4 98 2 10 98 110 0 454 0.00 0.00 0 564 0.00 0.00 2.93 0 0 0 0 . 1 . 003 nuclear build full . protein 20.65 20.65 0 106 0 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.42 0 0 0 0 . 1 . 004 nuclear build full . protein 17.86 17.86 0 106 4 98 2 16 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.90 0 0 0 0 . 1 . 005 nuclear build full . protein 13.95 13.95 0 106 0 98 2 14 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.30 0 0 0 0 . 1 . 006 nuclear build full . protein 22.32 22.32 0 106 0 98 6 14 90 110 0 454 0.00 0.00 0 564 0.00 0.00 2.55 0 0 0 0 . 1 . 007 nuclear build full . protein 25.11 25.11 0 106 0 98 1 13 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.50 0 0 0 0 . 1 . 008 nuclear build full . protein 15.62 15.62 0 106 0 98 6 10 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.35 0 0 0 0 . 1 . 009 nuclear build full . protein 17.86 17.86 0 106 2 98 6 12 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.67 0 0 0 0 . 1 . 010 nuclear build full . protein 18.42 18.42 0 106 2 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.61 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 19.31 19.31 0 92 0 84 4 12 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.47 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 30.24 30.24 0 92 4 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 3.09 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 22.52 22.52 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.50 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 19.31 19.31 0 92 4 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.95 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 17.37 17.37 0 92 0 84 2 12 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.39 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 25.74 25.74 0 92 0 84 2 14 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.59 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 28.96 28.96 0 92 0 84 1 13 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.60 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 18.02 18.02 0 92 0 84 6 8 82 96 0 398 0.00 0.00 0 494 0.00 0.00 2.41 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 20.59 20.59 0 92 2 84 6 10 80 96 0 398 0.00 0.00 0 494 0.00 0.00 2.78 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 22.52 22.52 0 92 2 84 2 10 84 96 0 398 0.00 0.00 0 494 0.00 0.00 2.74 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 16.74 16.74 0 106 0 98 4 12 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.38 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 26.23 26.23 0 106 4 98 2 10 98 110 0 454 0.00 0.00 0 564 0.00 0.00 2.94 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 20.65 20.65 0 106 0 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.42 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 17.86 17.86 0 106 4 98 2 16 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.90 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 15.07 15.07 0 106 0 98 2 14 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.33 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 23.44 23.44 0 106 0 98 6 14 90 110 0 454 0.00 0.00 0 564 0.00 0.00 2.57 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 26.23 26.23 0 106 0 98 1 13 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.52 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 15.62 15.62 0 106 0 98 6 10 94 110 0 454 0.00 0.00 0 564 0.00 0.00 2.35 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 17.86 17.86 0 106 2 98 6 12 92 110 0 454 0.00 0.00 0 564 0.00 0.00 2.67 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 19.53 19.53 0 106 2 98 2 12 96 110 0 454 0.00 0.00 0 564 0.00 0.00 2.64 0 0 0 0 . 1 stop_ save_