data_2kd3_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 2kd3 _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 114.78 114.78 0 45 10 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.32 0 0 0 0 . 1 . 002 nuclear orig core . protein 110.82 110.82 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.23 0 0 0 0 . 1 . 003 nuclear orig core . protein 113.46 113.46 0 45 5 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.09 0 0 0 0 . 1 . 004 nuclear orig core . protein 92.35 92.35 0 45 7 40 3 3 34 40 0 181 0.00 0.00 1 221 0.45 2.17 4.03 0 0 0 0 . 1 . 005 nuclear orig core . protein 117.41 117.41 0 45 10 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.29 0 0 0 0 . 1 . 006 nuclear orig core . protein 110.82 110.82 0 45 9 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.19 0 0 0 0 . 1 . 007 nuclear orig core . protein 93.67 93.67 0 45 8 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.16 0 0 0 0 . 1 . 008 nuclear orig core . protein 77.84 77.84 0 45 8 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.05 0 0 0 0 . 1 . 009 nuclear orig core . protein 116.09 116.09 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.25 0 0 0 0 . 1 . 010 nuclear orig core . protein 89.71 89.71 0 45 9 40 3 4 33 40 0 181 0.00 0.00 1 221 0.45 2.17 4.15 0 0 0 0 . 1 . 011 nuclear orig core . protein 102.90 102.90 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.20 0 0 0 0 . 1 . 012 nuclear orig core . protein 92.35 92.35 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.08 0 0 0 0 . 1 . 013 nuclear orig core . protein 125.33 125.33 0 45 10 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.36 0 0 0 0 . 1 . 014 nuclear orig core . protein 109.50 109.50 0 45 11 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.33 0 0 0 0 . 1 . 015 nuclear orig core . protein 88.39 88.39 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.06 0 0 0 0 . 1 . 001 nuclear orig full . protein 113.27 113.27 0 90 18 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.29 0 0 0 0 . 1 . 002 nuclear orig full . protein 116.50 116.50 0 90 23 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.36 0 0 0 0 . 1 . 003 nuclear orig full . protein 100.97 100.97 0 90 16 83 5 17 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.22 0 0 0 0 . 1 . 004 nuclear orig full . protein 91.91 91.91 0 90 18 83 7 12 76 95 0 387 0.00 0.00 1 482 0.21 1.03 4.18 0 0 0 0 . 1 . 005 nuclear orig full . protein 108.74 108.74 0 90 19 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.32 0 0 0 0 . 1 . 006 nuclear orig full . protein 100.32 100.32 0 90 18 83 8 17 70 95 0 387 0.00 0.00 0 482 0.00 0.00 4.29 0 0 0 0 . 1 . 007 nuclear orig full . protein 94.50 94.50 0 90 16 83 6 14 75 95 0 387 0.00 0.00 0 482 0.00 0.00 4.17 0 0 0 0 . 1 . 008 nuclear orig full . protein 84.14 84.14 0 90 18 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.17 0 0 0 0 . 1 . 009 nuclear orig full . protein 116.50 116.50 0 90 21 83 7 15 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.37 0 0 0 0 . 1 . 010 nuclear orig full . protein 108.74 108.74 0 90 20 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.34 0 0 0 0 . 1 . 011 nuclear orig full . protein 106.80 106.80 0 90 18 83 8 14 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.28 0 0 0 0 . 1 . 012 nuclear orig full . protein 111.33 111.33 0 90 21 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.31 0 0 0 0 . 1 . 013 nuclear orig full . protein 112.62 112.62 0 90 16 83 9 16 70 95 0 387 0.00 0.00 1 482 0.21 1.03 4.30 0 0 0 0 . 1 . 014 nuclear orig full . protein 139.16 139.16 0 90 22 83 7 19 69 95 0 387 0.00 0.00 1 482 0.21 1.03 4.50 0 0 0 0 . 1 . 015 nuclear orig full . protein 125.57 125.57 0 90 13 83 7 10 78 95 0 387 0.00 0.00 0 482 0.00 0.00 4.17 0 0 0 0 . 1 . 001 nuclear build core . protein 127.32 127.32 0 45 10 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.36 0 0 0 0 . 1 . 002 nuclear build core . protein 116.71 116.71 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.25 0 0 0 0 . 1 . 003 nuclear build core . protein 119.36 119.36 0 45 5 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.11 0 0 0 0 . 1 . 004 nuclear build core . protein 106.10 106.10 0 45 8 40 3 3 34 40 0 181 0.00 0.00 1 221 0.45 2.17 4.14 0 0 0 0 . 1 . 005 nuclear build core . protein 118.04 118.04 0 45 10 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.30 0 0 0 0 . 1 . 006 nuclear build core . protein 106.10 106.10 0 45 9 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.18 0 0 0 0 . 1 . 007 nuclear build core . protein 95.49 95.49 0 45 8 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.17 0 0 0 0 . 1 . 008 nuclear build core . protein 100.80 100.80 0 45 8 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.16 0 0 0 0 . 1 . 009 nuclear build core . protein 110.08 110.08 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.23 0 0 0 0 . 1 . 010 nuclear build core . protein 100.80 100.80 0 45 9 40 3 4 33 40 0 181 0.00 0.00 1 221 0.45 2.17 4.20 0 0 0 0 . 1 . 011 nuclear build core . protein 99.47 99.47 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.18 0 0 0 0 . 1 . 012 nuclear build core . protein 104.77 104.77 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.13 0 0 0 0 . 1 . 013 nuclear build core . protein 112.73 112.73 0 45 10 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.31 0 0 0 0 . 1 . 014 nuclear build core . protein 115.38 115.38 0 45 11 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.35 0 0 0 0 . 1 . 015 nuclear build core . protein 104.77 104.77 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.13 0 0 0 0 . 1 . 001 nuclear build full . protein 123.14 123.14 0 90 18 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.33 0 0 0 0 . 1 . 002 nuclear build full . protein 119.25 119.25 0 90 23 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.37 0 0 0 0 . 1 . 003 nuclear build full . protein 110.17 110.17 0 90 16 83 5 17 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.26 0 0 0 0 . 1 . 004 nuclear build full . protein 102.40 102.40 0 90 19 83 7 12 76 95 0 387 0.00 0.00 1 482 0.21 1.03 4.24 0 0 0 0 . 1 . 005 nuclear build full . protein 110.17 110.17 0 90 19 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.32 0 0 0 0 . 1 . 006 nuclear build full . protein 99.16 99.16 0 90 18 83 8 17 70 95 0 387 0.00 0.00 0 482 0.00 0.00 4.28 0 0 0 0 . 1 . 007 nuclear build full . protein 100.45 100.45 0 90 17 83 6 14 75 95 0 387 0.00 0.00 0 482 0.00 0.00 4.21 0 0 0 0 . 1 . 008 nuclear build full . protein 101.10 101.10 0 90 19 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.26 0 0 0 0 . 1 . 009 nuclear build full . protein 113.42 113.42 0 90 21 83 7 15 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.36 0 0 0 0 . 1 . 010 nuclear build full . protein 124.43 124.43 0 90 20 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.39 0 0 0 0 . 1 . 011 nuclear build full . protein 104.99 104.99 0 90 18 83 8 14 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.27 0 0 0 0 . 1 . 012 nuclear build full . protein 119.90 119.90 0 90 21 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.34 0 0 0 0 . 1 . 013 nuclear build full . protein 112.12 112.12 0 90 16 83 9 16 70 95 0 387 0.00 0.00 1 482 0.21 1.03 4.30 0 0 0 0 . 1 . 014 nuclear build full . protein 145.82 145.82 0 90 22 83 7 19 69 95 0 387 0.00 0.00 1 482 0.21 1.03 4.52 0 0 0 0 . 1 . 015 nuclear build full . protein 141.28 141.28 0 90 13 83 7 10 78 95 0 387 0.00 0.00 0 482 0.00 0.00 4.22 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 128.65 128.65 0 45 10 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.37 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 118.04 118.04 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.26 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 119.36 119.36 0 45 5 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.11 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 106.10 106.10 0 45 7 40 3 3 34 40 0 181 0.00 0.00 1 221 0.45 2.17 4.09 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 119.36 119.36 0 45 10 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.30 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 106.10 106.10 0 45 9 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.18 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 95.49 95.49 0 45 8 40 3 5 32 40 0 181 0.00 0.00 0 221 0.00 0.00 4.17 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 100.80 100.80 0 45 8 40 3 4 33 40 0 181 0.00 0.00 0 221 0.00 0.00 4.16 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 111.41 111.41 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.23 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 103.45 103.45 0 45 9 40 3 4 33 40 0 181 0.00 0.00 1 221 0.45 2.17 4.21 0 0 0 0 . 1 . 011 nuclear nobuild core . protein 99.47 99.47 0 45 10 40 3 3 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.18 0 0 0 0 . 1 . 012 nuclear nobuild core . protein 104.77 104.77 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.13 0 0 0 0 . 1 . 013 nuclear nobuild core . protein 112.73 112.73 0 45 10 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.31 0 0 0 0 . 1 . 014 nuclear nobuild core . protein 119.36 119.36 0 45 11 40 3 5 32 40 0 181 0.00 0.00 1 221 0.45 2.17 4.37 0 0 0 0 . 1 . 015 nuclear nobuild core . protein 107.43 107.43 0 45 8 40 2 4 34 40 0 181 0.00 0.00 0 221 0.00 0.00 4.14 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 123.78 123.78 0 90 18 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.33 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 120.54 120.54 0 90 23 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.38 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 110.82 110.82 0 90 16 83 5 17 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.26 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 103.05 103.05 0 90 18 83 7 12 76 95 0 387 0.00 0.00 1 482 0.21 1.03 4.23 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 110.82 110.82 0 90 19 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.33 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 99.81 99.81 0 90 18 83 8 17 70 95 0 387 0.00 0.00 0 482 0.00 0.00 4.29 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 101.10 101.10 0 90 16 83 6 14 75 95 0 387 0.00 0.00 0 482 0.00 0.00 4.19 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 101.75 101.75 0 90 18 83 7 14 74 95 0 387 0.00 0.00 0 482 0.00 0.00 4.25 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 114.71 114.71 0 90 21 83 7 15 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.36 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 126.38 126.38 0 90 20 83 8 15 72 95 0 387 0.00 0.00 1 482 0.21 1.03 4.40 0 0 0 0 . 1 . 011 nuclear nobuild full . protein 104.99 104.99 0 90 18 83 8 14 73 95 0 387 0.00 0.00 0 482 0.00 0.00 4.27 0 0 0 0 . 1 . 012 nuclear nobuild full . protein 120.54 120.54 0 90 21 83 7 12 76 95 0 387 0.00 0.00 0 482 0.00 0.00 4.35 0 0 0 0 . 1 . 013 nuclear nobuild full . protein 111.47 111.47 0 90 16 83 9 16 70 95 0 387 0.00 0.00 1 482 0.21 1.03 4.29 0 0 0 0 . 1 . 014 nuclear nobuild full . protein 147.76 147.76 0 90 22 83 7 19 69 95 0 387 0.00 0.00 1 482 0.21 1.03 4.53 0 0 0 0 . 1 . 015 nuclear nobuild full . protein 142.58 142.58 0 90 13 83 7 10 78 95 0 387 0.00 0.00 0 482 0.00 0.00 4.23 0 0 0 0 . 1 stop_ save_