data_1dby_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 1dby _Structure_validation_oneline.Date_analyzed 2016-10-08 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear build core . protein 1.89 1.89 0 96 10 88 2 9 90 101 0 411 0.00 0.00 1 512 0.20 0.97 2.33 0 0 0 0 . 1 . 002 nuclear build core . protein 1.26 1.26 0 96 7 88 1 12 88 101 0 411 0.00 0.00 0 512 0.00 0.00 2.15 0 0 0 0 . 1 . 003 nuclear build core . protein 0.63 0.63 0 96 5 88 1 14 86 101 0 411 0.00 0.00 0 512 0.00 0.00 1.94 0 0 0 0 . 1 . 004 nuclear build core . protein 0.63 0.63 0 96 5 88 0 14 87 101 0 411 0.00 0.00 0 512 0.00 0.00 1.92 0 0 0 0 . 1 . 005 nuclear build core . protein 3.16 3.16 0 96 7 88 0 11 90 101 0 411 0.00 0.00 1 512 0.20 0.97 2.36 0 0 0 0 . 1 . 006 nuclear build core . protein 5.05 5.05 0 96 9 88 1 14 86 101 0 411 0.00 0.00 1 512 0.20 0.97 2.69 0 0 0 0 . 1 . 007 nuclear build core . protein 2.53 2.53 0 96 2 88 2 14 85 101 0 411 0.00 0.00 1 512 0.20 0.97 1.98 0 0 0 0 . 1 . 008 nuclear build core . protein 1.89 1.89 0 96 4 88 0 16 85 101 0 411 0.00 0.00 0 512 0.00 0.00 2.13 0 0 0 0 . 1 . 009 nuclear build core . protein 1.26 1.26 0 96 6 88 0 8 93 101 0 411 0.00 0.00 0 512 0.00 0.00 1.96 0 0 0 0 . 1 . 010 nuclear build core . protein 0.63 0.63 0 96 6 88 1 11 89 101 0 411 0.00 0.00 0 512 0.00 0.00 1.94 0 0 0 0 . 1 . 011 nuclear build core . protein 1.26 1.26 0 96 6 88 0 9 92 101 0 411 0.00 0.00 0 512 0.00 0.00 2.00 0 0 0 0 . 1 . 012 nuclear build core . protein 3.79 3.79 0 96 8 88 1 12 88 101 0 411 0.00 0.00 0 512 0.00 0.00 2.51 0 0 0 0 . 1 . 013 nuclear build core . protein 1.89 1.89 0 96 9 88 0 12 89 101 0 411 0.00 0.00 1 512 0.20 0.97 2.32 0 0 0 0 . 1 . 014 nuclear build core . protein 1.26 1.26 0 96 8 88 0 15 86 101 0 411 0.00 0.00 3 512 0.59 2.91 2.23 0 0 0 0 . 1 . 015 nuclear build core . protein 2.53 2.53 0 96 7 88 1 10 90 101 0 411 0.00 0.00 0 512 0.00 0.00 2.29 0 0 0 0 . 1 . 016 nuclear build core . protein 1.89 1.89 0 96 4 88 0 13 88 101 0 411 0.00 0.00 0 512 0.00 0.00 2.07 0 0 0 0 . 1 . 017 nuclear build core . protein 6.94 6.94 0 96 9 88 1 13 87 101 0 411 0.00 0.00 2 512 0.39 0.97 2.79 0 0 0 0 . 1 . 018 nuclear build core . protein 8.84 8.84 1 96 9 88 2 10 89 101 0 411 0.00 0.00 5 512 0.98 2.91 2.84 0 0 0 0 . 1 . 019 nuclear build core . protein 3.16 3.16 0 96 6 88 0 13 88 101 0 411 0.00 0.00 1 512 0.20 0.97 2.36 0 0 0 0 . 1 . 020 nuclear build core . protein 0.63 0.63 0 96 11 88 0 14 87 101 0 411 0.00 0.00 0 512 0.00 0.00 2.18 0 0 0 0 . 1 . 021 nuclear build core . protein 3.16 3.16 0 96 8 88 0 14 87 101 0 411 0.00 0.00 2 512 0.39 0.97 2.47 0 0 0 0 . 1 . 022 nuclear build core . protein 3.79 3.79 0 96 5 88 0 19 82 101 0 411 0.00 0.00 0 512 0.00 0.00 2.46 0 0 0 0 . 1 . 023 nuclear build core . protein 6.31 6.31 0 96 10 88 0 17 84 101 0 411 0.00 0.00 2 512 0.39 0.97 2.84 0 0 0 0 . 1 . 024 nuclear build core . protein 1.26 1.26 0 96 6 88 1 10 90 101 0 411 0.00 0.00 0 512 0.00 0.00 2.05 0 0 0 0 . 1 . 025 nuclear build core . protein 2.53 2.53 0 96 7 88 3 14 84 101 0 411 0.00 0.00 1 512 0.20 0.97 2.41 0 0 0 0 . 1 . 026 nuclear build core . protein 1.89 1.89 0 96 4 88 1 10 90 101 0 411 0.00 0.00 2 512 0.39 0.97 2.02 0 0 0 0 . 1 . 027 nuclear build core . protein 5.05 5.05 0 96 9 88 2 13 86 101 0 411 0.00 0.00 1 512 0.20 0.97 2.69 0 0 0 0 . 1 . 028 nuclear build core . protein 1.89 1.89 0 96 9 88 1 14 86 101 0 411 0.00 0.00 0 512 0.00 0.00 2.38 0 0 0 0 . 1 . 001 nuclear build full . protein 1.81 1.81 0 100 11 92 2 10 93 105 0 427 0.00 0.00 1 532 0.19 0.93 2.34 0 0 0 0 . 1 . 002 nuclear build full . protein 1.21 1.21 0 100 8 92 1 12 92 105 0 427 0.00 0.00 0 532 0.00 0.00 2.16 0 0 0 0 . 1 . 003 nuclear build full . protein 0.60 0.60 0 100 6 92 2 14 89 105 0 427 0.00 0.00 0 532 0.00 0.00 1.98 0 0 0 0 . 1 . 004 nuclear build full . protein 0.60 0.60 0 100 6 92 0 16 89 105 0 427 0.00 0.00 0 532 0.00 0.00 1.98 0 0 0 0 . 1 . 005 nuclear build full . protein 3.02 3.02 0 100 8 92 0 13 92 105 0 427 0.00 0.00 1 532 0.19 0.93 2.41 0 0 0 0 . 1 . 006 nuclear build full . protein 4.84 4.84 0 100 11 92 1 16 88 105 0 427 0.00 0.00 1 532 0.19 0.93 2.75 0 0 0 0 . 1 . 007 nuclear build full . protein 3.02 3.02 0 100 4 92 3 15 87 105 0 427 0.00 0.00 2 532 0.38 1.87 2.27 0 0 0 0 . 1 . 008 nuclear build full . protein 1.81 1.81 0 100 5 92 0 17 88 105 0 427 0.00 0.00 0 532 0.00 0.00 2.18 0 0 0 0 . 1 . 009 nuclear build full . protein 1.21 1.21 0 100 7 92 0 9 96 105 0 427 0.00 0.00 0 532 0.00 0.00 2.01 0 0 0 0 . 1 . 010 nuclear build full . protein 0.60 0.60 0 100 7 92 1 11 93 105 0 427 0.00 0.00 0 532 0.00 0.00 1.96 0 0 0 0 . 1 . 011 nuclear build full . protein 1.21 1.21 0 100 7 92 0 10 95 105 0 427 0.00 0.00 0 532 0.00 0.00 2.04 0 0 0 0 . 1 . 012 nuclear build full . protein 3.63 3.63 0 100 9 92 1 14 90 105 0 427 0.00 0.00 0 532 0.00 0.00 2.55 0 0 0 0 . 1 . 013 nuclear build full . protein 1.81 1.81 0 100 11 92 0 13 92 105 0 427 0.00 0.00 1 532 0.19 0.93 2.37 0 0 0 0 . 1 . 014 nuclear build full . protein 1.21 1.21 0 100 9 92 0 17 88 105 0 427 0.00 0.00 3 532 0.56 2.80 2.27 0 0 0 0 . 1 . 015 nuclear build full . protein 3.02 3.02 0 100 8 92 1 11 93 105 0 427 0.00 0.00 0 532 0.00 0.00 2.39 0 0 0 0 . 1 . 016 nuclear build full . protein 1.81 1.81 0 100 5 92 0 13 92 105 0 427 0.00 0.00 0 532 0.00 0.00 2.11 0 0 0 0 . 1 . 017 nuclear build full . protein 6.65 6.65 0 100 11 92 1 13 91 105 0 427 0.00 0.00 2 532 0.38 0.93 2.81 0 0 0 0 . 1 . 018 nuclear build full . protein 9.07 9.07 1 100 10 92 2 11 92 105 0 427 0.00 0.00 5 532 0.94 2.80 2.88 0 0 0 0 . 1 . 019 nuclear build full . protein 3.02 3.02 0 100 7 92 0 15 90 105 0 427 0.00 0.00 1 532 0.19 0.93 2.41 0 0 0 0 . 1 . 020 nuclear build full . protein 0.60 0.60 0 100 12 92 0 15 90 105 0 427 0.00 0.00 0 532 0.00 0.00 2.19 0 0 0 0 . 1 . 021 nuclear build full . protein 3.02 3.02 0 100 10 92 0 15 90 105 0 427 0.00 0.00 2 532 0.38 0.93 2.53 0 0 0 0 . 1 . 022 nuclear build full . protein 3.63 3.63 0 100 7 92 0 20 85 105 0 427 0.00 0.00 0 532 0.00 0.00 2.54 0 0 0 0 . 1 . 023 nuclear build full . protein 6.65 6.65 0 100 11 92 0 19 86 105 0 427 0.00 0.00 2 532 0.38 0.93 2.89 0 0 0 0 . 1 . 024 nuclear build full . protein 1.21 1.21 0 100 8 92 1 11 93 105 0 427 0.00 0.00 0 532 0.00 0.00 2.14 0 0 0 0 . 1 . 025 nuclear build full . protein 2.42 2.42 0 100 8 92 3 15 87 105 0 427 0.00 0.00 1 532 0.19 0.93 2.43 0 0 0 0 . 1 . 026 nuclear build full . protein 1.81 1.81 0 100 5 92 1 11 93 105 0 427 0.00 0.00 2 532 0.38 0.93 2.08 0 0 0 0 . 1 . 027 nuclear build full . protein 5.44 5.44 0 100 10 92 3 14 88 105 0 427 0.00 0.00 1 532 0.19 0.93 2.76 0 0 0 0 . 1 . 028 nuclear build full . protein 1.81 1.81 0 100 10 92 1 15 89 105 0 427 0.00 0.00 0 532 0.00 0.00 2.39 0 0 0 0 . 1 stop_ save_